RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where bioproject = "PRJNA515078" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA515078 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4313715 4313715 PRJNA515078_P_NODE_1784_length_727_cov_2.963768_g1606_i0 PRJNA515078 1784 727 2.963768 21.54659336 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 123 1.14e-29   NR XP_009029644.1 6412 g1606 i0 65.2 6.06189821182944 92 31 38 1 3 278 215 305 XP_009029644.1 hypothetical protein HELRODRAFT_186151 [Helobdella robusta] diamond 4407 124 0.991935483870968 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
8139802 8139802 PRJNA515078_P_NODE_10087_length_285_cov_1.185484_g9854_i0 PRJNA515078 10087 285 1.185484 3.3786294 Ailoscolex lacteospumosus 1046305 Annelida Annelida 54.7 0.007   NTclustered gi|2920003644|emb|OZ238875.1| 1046305 g9854 i0 94.444 0.224561403508772 36 1 12 1 210 244 520155 520190 Ailoscolex lacteospumosus genome assembly, chromosome: 16 blastn 64 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
8139819 8139819 PRJNA515078_P_NODE_12467_length_252_cov_1.269767_g12234_i0 PRJNA515078 12467 252 1.269767 3.19981284 Ailoscolex lacteospumosus 1046305 Annelida Annelida 58.4 4.91e-4   NTclustered gi|2920003527|emb|OZ238867.1| 1046305 g12234 i0 100 0.575396825396825 31 0 12 0 131 161 20955849 20955819 Ailoscolex lacteospumosus genome assembly, chromosome: 8 blastn 145 58.4 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
9414982 9414982 PRJNA515078_P_NODE_24108_length_177_cov_1.114286_g23875_i0 PRJNA515078 24108 177 1.114286 1.97228622 Hirudo verbana 311461 Annelida Annelida 58.4 3.21e-4   NTclustered gi|2918369693|emb|OZ237785.1| 311461 g23875 i0 100 1.44067796610169 31 0 18 0 20 50 797032 797002 Hirudo verbana genome assembly, chromosome: 7 blastn 255 58.4 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
14515793 14515793 PRJNA515078_P_NODE_26152_length_170_cov_1.172932_g25919_i0 PRJNA515078 26152 170 1.172932 1.9939844 Hirudo verbana 311461 Annelida Annelida 54.7 0.004   NTclustered gi|2918369714|emb|OZ237790.1| 311461 g25919 i0 100 0.170588235294118 29 0 17 0 104 132 4048964 4048992 Hirudo verbana genome assembly, chromosome: 12 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
16413655 16413655 PRJNA515078_P_NODE_30173_length_159_cov_1.278689_g29940_i0 PRJNA515078 30173 159 1.278689 2.03311551 Opisthokonta 33154 Annelida Annelida 52.8 0.013   NTclustered gi|675859291|ref|XM_009016958.1| 6412 g29940 i0 100 0.528301886792453 28 0 18 0 132 159 1089 1116 Helobdella robusta hypothetical protein partial mRNA blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
22163747 22163747 PRJNA515078_P_NODE_7338_length_344_cov_1.306189_g7105_i0 PRJNA515078 7338 344 1.306189 4.49329016 Hirudo verbana 311461 Annelida Annelida 54.7 0.009   NTclustered gi|2918369620|emb|OZ237782.1| 311461 g7105 i0 100 0.927325581395349 29 0 8 0 222 250 12192786 12192814 Hirudo verbana genome assembly, chromosome: 4 blastn 319 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
27393420 27393420 PRJNA515078_P_NODE_9183_length_301_cov_1.420455_g8950_i0 PRJNA515078 9183 301 1.420455 4.27556955 Capitella teleta 283909 Annelida Annelida 145 7.14e-38   NR ELT93316.1 283909 g8950 i0 71.3 0.93687707641196 94 26 93.7 1 300 19 16 108 ELT93316.1 hypothetical protein CAPTEDRAFT_125179 [Capitella teleta] diamond 282 145 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta
28087757 28087757 PRJNA515078_P_NODE_30525_length_158_cov_1.611570_g30292_i0 PRJNA515078 30525 158 1.61157 2.5462806 Ridgeia piscesae 27915 Annelida Annelida 70.9 7.53e-13   NR KAK2171970.1 27915 g30292 i0 72.1 0.816455696202532 43 12 81.6 0 158 30 143 185 KAK2171970.1 hypothetical protein NP493_1009g01009 [Ridgeia piscesae] diamond 129 70.9 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
28387374 28387374 PRJNA515078_P_NODE_13486_length_241_cov_1.147059_g13253_i0 PRJNA515078 13486 241 1.147059 2.76441219 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 62.8 2.35e-10   NR XP_009023537.1 6412 g13253 i0 50.9 3.59751037344398 57 28 71 0 239 69 44 100 XP_009023537.1 hypothetical protein HELRODRAFT_84675, partial [Helobdella robusta] diamond 867 62.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
28593185 28593185 PRJNA515078_P_NODE_7987_length_326_cov_1.065744_g7754_i0 PRJNA515078 7987 326 1.065744 3.47432544 Helobdella robusta 6412 Annelida Annelida 70.9 5.04e-12   NR XP_009021849.1 6412 g7754 i0 38.1 6.66257668711656 105 47 96.6 1 3 317 103 189 XP_009021849.1 hypothetical protein HELRODRAFT_83625 [Helobdella robusta] diamond 2172 70.9 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
28829382 28829382 PRJNA515078_P_NODE_8788_length_308_cov_1.782288_g8555_i0 PRJNA515078 8788 308 1.782288 5.48944704 Metazoa 33208 Annelida Annelida 92 1.19e-19   NR CAH1796383.1 6347 g8555 i0 48.2 2.47402597402597 85 43 81.8 1 253 2 169 253 CAH1796383.1 unnamed protein product [Owenia fusiformis] diamond 762 92.4 0.995670995670996 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
29808169 29808169 PRJNA515078_P_NODE_21091_length_189_cov_1.250000_g20858_i0 PRJNA515078 21091 189 1.25 2.3625 Metazoa 33208 Annelida Annelida 82 2.54e-16   NR KAK2162310.1 53620 g20858 i0 68.5 1.79365079365079 54 17 85.7 0 164 3 309 362 KAK2162310.1 hypothetical protein LSH36_100g00026 [Paralvinella palmiformis] diamond 339 82 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
30361982 30361982 PRJNA515078_P_NODE_20432_length_192_cov_1.258065_g20199_i0 PRJNA515078 20432 192 1.258065 2.4154848 Capitella teleta 283909 Annelida Annelida 69.3 7.63e-12   NR ELU09893.1 283909 g20199 i0 49.2 1.9375 63 32 98.4 0 191 3 133 195 ELU09893.1 hypothetical protein CAPTEDRAFT_178707 [Capitella teleta] diamond 372 69.3 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta
30456701 30456701 PRJNA515078_P_NODE_31293_length_157_cov_0.975000_g31060_i0 PRJNA515078 31293 157 0.975 1.53075 Paralvinella palmiformis 53620 Annelida Annelida 56.6 1.47e-7   NR KAK2153638.1 53620 g31060 i0 60.5 0.821656050955414 43 17 82.2 0 157 29 261 303 KAK2153638.1 hypothetical protein LSH36_291g09021 [Paralvinella palmiformis] diamond 129 56.6 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
30597956 30597956 PRJNA515078_P_NODE_6793_length_358_cov_3.031153_g6560_i0 PRJNA515078 6793 358 3.031153 10.85152774 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 76.3 7.61e-14   NR ELU12778.1 283909 g6560 i0 42.7 6.16759776536313 103 59 86.3 0 357 49 128 230 ELU12778.1 hypothetical protein CAPTEDRAFT_170468 [Capitella teleta] diamond 2208 76.3 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta
30661275 30661275 PRJNA515078_P_NODE_19613_length_196_cov_1.440252_g19380_i0 PRJNA515078 19613 196 1.440252 2.82289392 Polychaeta 6341 Annelida Annelida 41.2 0.0298   NR CAH1781705.1 6347 g19380 i0 31.3 2.73979591836735 67 44 99.5 1 196 2 37 103 CAH1781705.1 unnamed protein product [Owenia fusiformis] diamond 537 41.2 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
31467845 31467845 PRJNA515078_P_NODE_30696_length_158_cov_1.289256_g30463_i0 PRJNA515078 30696 158 1.289256 2.03702448 Helobdella robusta 6412 Annelida Annelida 61.2 2.41e-9   NR XP_009018535.1 6412 g30463 i0 62.7 4.87974683544304 51 17 96.8 1 1 153 64 112 XP_009018535.1 hypothetical protein HELRODRAFT_185645 [Helobdella robusta] diamond 771 61.2 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
31546480 31546480 PRJNA515078_P_NODE_14676_length_229_cov_1.817708_g14443_i0 PRJNA515078 14676 229 1.817708 4.16255132 root 1 Root_unresolved Root_unresolved 119 1.2e-30   NR CAH1794795.1 6347 g14443 i0 71.1 18.9170305676856 76 22 99.6 0 228 1 195 270 CAH1794795.1 unnamed protein product [Owenia fusiformis] diamond 4332 120 0.991666666666667 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
31767639 31767639 PRJNA515078_P_NODE_17317_length_209_cov_3.906977_g17084_i0 PRJNA515078 17317 209 3.906977 8.16558193 Metazoa 33208 Annelida Annelida 45.8 2.35e-4   NR KAK2141783.1 53620 g17084 i0 41.1 4.62200956937799 56 29 80.4 1 6 173 25 76 KAK2141783.1 hypothetical protein LSH36_1041g00012 [Paralvinella palmiformis] diamond 966 45.8 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
32858228 32858228 PRJNA515078_P_NODE_11520_length_263_cov_1.969027_g11287_i0 PRJNA515078 11520 263 1.969027 5.17854101 Dimorphilus gyrociliatus 2664684 Annelida Annelida 65.5 4.64e-10   NR CAD5124401.1 2664684 g11287 i0 45.3 2.3041825095057 64 33 71.9 2 6 194 489 551 CAD5124401.1 DgyrCDS12686 [Dimorphilus gyrociliatus] diamond 606 65.5 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Dinophilidae Dimorphilus Dimorphilus gyrociliatus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;