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contig_metadata

28 rows where bioproject = "PRJNA515078", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 28 ✖

tax_phylum 1

  • Acidobacteriota · 28 ✖

tax_kingdom 1

bioproject 1

  • PRJNA515078 · 28 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22788028 22788028 PRJNA515078_P_NODE_34578_length_150_cov_1.274336_g34345_i0 PRJNA515078 34578 150 1.274336 1.911504 Pseudomonadati 3379134 Bacteria Bacteria 86.3 3.12e-18   NR MEW6320827.1 1978231 g34345 i0 83.7 10.7 49 8 98 0 3 149 310 358 MEW6320827.1 acetyl-CoA C-acetyltransferase [Acidobacteriota bacterium] diamond 1605 86.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27203366 27203366 PRJNA515078_P_NODE_18462_length_202_cov_1.551515_g18229_i0 PRJNA515078 18462 202 1.551515 3.1340603 Bryobacterales bacterium 2026791 Bacteria Bacteria 114 2.59e-29   NR MBL0156400.1 2026791 g18229 i0 76.1 2.98514851485149 67 16 99.5 0 2 202 111 177 MBL0156400.1 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Bryobacterales bacterium] diamond 603 114 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
27313987 27313987 PRJNA515078_P_NODE_9403_length_297_cov_1.650000_g9170_i0 PRJNA515078 9403 297 1.65 4.9005 Pseudomonadati 3379134 Bacteria Bacteria 50.1 1.49e-4   NR HTM40359.1 2282142 g9170 i0 35.9 3.23232323232323 92 54 91.9 3 18 290 103 190 HTM40359.1 class I SAM-dependent methyltransferase [Terriglobales bacterium] diamond 960 50.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
27740876 27740876 PRJNA515078_P_NODE_20244_length_193_cov_1.250000_g20011_i0 PRJNA515078 20244 193 1.25 2.4125 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 42 0.0356   NR MFN7915667.1 2910147 g20011 i0 46.7 0.699481865284974 45 23 68.4 1 26 157 16 60 MFN7915667.1 HAMP domain-containing sensor histidine kinase [Vicinamibacterales bacterium] diamond 135 42 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
27866745 27866745 PRJNA515078_P_NODE_6865_length_357_cov_1.353125_g6632_i0 PRJNA515078 6865 357 1.353125 4.83065625 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 43.9 0.0159   NR HEY2867667.1 2283092 g6632 i0 39.7 0.529411764705882 63 34 50.4 2 204 25 27 88 HEY2867667.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 189 43.9 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28024817 28024817 PRJNA515078_P_NODE_27345_length_166_cov_2.116279_g27112_i0 PRJNA515078 27345 166 2.116279 3.51302314 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 49.3 6.47e-5   NR MEZ5333676.1 2651171 g27112 i0 53.8 0.704819277108434 39 18 70.5 0 117 1 6 44 MEZ5333676.1 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase [Thermoanaerobaculia bacterium] diamond 117 49.3 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
28182340 28182340 PRJNA515078_P_NODE_16606_length_214_cov_1.327684_g16373_i0 PRJNA515078 16606 214 1.327684 2.84124376 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 68.6 1.93e-11   NR HJU44303.1 2910147 g16373 i0 50.7 1.99065420560748 71 35 99.5 0 1 213 258 328 HJU44303.1 Calx-beta domain-containing protein [Vicinamibacterales bacterium] diamond 426 68.6 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
28213953 28213953 PRJNA515078_P_NODE_8086_length_323_cov_1.405594_g7853_i0 PRJNA515078 8086 323 1.405594 4.5400686200000004 Acidobacteriota bacterium 1978231 Bacteria Bacteria 58.5 2.32e-7   NR MBU6328700.1 1978231 g7853 i0 60 1.21671826625387 45 18 41.8 0 321 187 282 326 MBU6328700.1 DUF4436 domain-containing protein [Acidobacteriota bacterium] diamond 393 58.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28608472 28608472 PRJNA515078_P_NODE_21987_length_185_cov_1.087838_g21754_i0 PRJNA515078 21987 185 1.087838 2.0125003 Pseudomonadati 3379134 Bacteria Bacteria 71.6 1.1e-12   NR HZN54526.1 2910585 g21754 i0 55.2 2.75675675675676 58 26 94.1 0 174 1 200 257 HZN54526.1 cohesin domain-containing protein [Candidatus Polarisedimenticolaceae bacterium] diamond 510 71.6 1 Bacteria   Pseudomonadati Acidobacteriota Candidatus Polarisedimenticolia Candidatus Polarisedimenticolales Candidatus Polarisedimenticolaceae   Candidatus Polarisedimenticolaceae bacterium
28908506 28908506 PRJNA515078_P_NODE_25748_length_171_cov_1.626866_g25515_i0 PRJNA515078 25748 171 1.626866 2.78194086 Acidobacteriota bacterium 1978231 Bacteria Bacteria 62.8 3e-10   NR HSW40161.1 1978231 g25515 i0 59.6 1 57 16 100 1 1 171 10 59 HSW40161.1 hypothetical protein [Acidobacteriota bacterium] diamond 171 62.8 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28908517 28908517 PRJNA515078_P_NODE_7988_length_326_cov_0.965398_g7755_i0 PRJNA515078 7988 326 0.965398 3.14719748 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 65.9 1.9e-10   NR HEX8847449.1 2283092 g7755 i0 42.7 4.04907975460123 96 46 81 3 59 322 1 95 HEX8847449.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 1320 65.9 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29239969 29239969 PRJNA515078_P_NODE_29889_length_160_cov_1.121951_g29656_i0 PRJNA515078 29889 160 1.121951 1.7951216 Pseudomonadati 3379134 Bacteria Bacteria 49.3 5.67e-5   NR MCB1043190.1 1978231 g29656 i0 46 7.4625 50 27 93.8 0 158 9 471 520 MCB1043190.1 2-oxo acid dehydrogenase subunit E2 [Acidobacteriota bacterium] diamond 1194 49.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29540142 29540142 PRJNA515078_P_NODE_12530_length_251_cov_1.612150_g12297_i0 PRJNA515078 12530 251 1.61215 4.0464965 Acidobacteriota bacterium 1978231 Bacteria Bacteria 66.2 4.01e-12   NR MCX6614242.1 1978231 g12297 i0 51.7 2.96414342629482 58 28 69.3 0 190 17 22 79 MCX6614242.1 hypothetical protein [Acidobacteriota bacterium] diamond 744 66.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29856058 29856058 PRJNA515078_P_NODE_7231_length_346_cov_2.841424_g6998_i0 PRJNA515078 7231 346 2.841424 9.83132704 Terriglobia bacterium 2081523 Bacteria Bacteria 57.4 4.16e-7   NR MBZ5628688.1 2081523 g6998 i0 41.3 0.65028901734104 75 43 65 1 3 227 117 190 MBZ5628688.1 PEP-CTERM sorting domain-containing protein [Terriglobia bacterium] diamond 225 57.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
30487928 30487928 PRJNA515078_P_NODE_13313_length_242_cov_2.156098_g13080_i0 PRJNA515078 13313 242 2.156098 5.21775716 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 44.7 0.00775   NR HEU4934527.1 2283092 g13080 i0 41.7 2.59090909090909 60 34 74.4 1 181 2 416 474 HEU4934527.1 FG-GAP-like repeat-containing protein [Pyrinomonadaceae bacterium] diamond 627 44.7 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30487943 30487943 PRJNA515078_P_NODE_23953_length_177_cov_1.735714_g23720_i0 PRJNA515078 23953 177 1.735714 3.07221378 Blastocatellia bacterium 2052146 Bacteria Bacteria 47.4 3.59e-4   NR MDX6497721.1 2052146 g23720 i0 46.6 0.983050847457627 58 31 98.3 0 175 2 2068 2125 MDX6497721.1 hypothetical protein [Blastocatellia bacterium] diamond 174 47.4 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
30740640 30740640 PRJNA515078_P_NODE_5934_length_388_cov_1.552707_g5701_i0 PRJNA515078 5934 388 1.552707 6.02450316 Terriglobales bacterium 2282142 Bacteria Bacteria 79.7 7.49e-15   NR HYL14841.1 2282142 g5701 i0 40.3 1.84020618556701 119 68 90.5 2 37 387 12 129 HYL14841.1 zinc-binding dehydrogenase [Terriglobales bacterium] diamond 714 79.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
30756147 30756147 PRJNA515078_P_NODE_17614_length_208_cov_1.140351_g17381_i0 PRJNA515078 17614 208 1.140351 2.37193008 Bacteria 2 Bacteria Bacteria 68.9 1e-11   NR HQR44452.1 2651171 g17381 i0 77.5 4.02403846153846 40 9 57.7 0 201 82 283 322 HQR44452.1 zinc metalloprotease [Thermoanaerobaculia bacterium] diamond 837 69.3 0.994227994227994 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
30803873 30803873 PRJNA515078_P_NODE_4074_length_479_cov_2.807692_g3842_i0 PRJNA515078 4074 479 2.807692 13.44884468 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 112 2.46e-26   NR MDR3737318.1 2052142 g3842 i0 45.2 0.914405010438413 146 71 88.3 4 478 56 166 307 MDR3737318.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 438 112 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
30993530 30993530 PRJNA515078_P_NODE_6654_length_363_cov_1.337423_g6421_i0 PRJNA515078 6654 363 1.337423 4.85484549 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 58.5 4.5e-7   NR HLK47220.1 2212468 g6421 i0 36.4 0.975206611570248 118 58 96.7 4 8 358 2194 2295 HLK47220.1 LamG-like jellyroll fold domain-containing protein [Bryobacteraceae bacterium] diamond 354 58.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
31261654 31261654 PRJNA515078_P_NODE_20015_length_194_cov_1.375796_g19782_i0 PRJNA515078 20015 194 1.375796 2.66904424 Pseudomonadati 3379134 Bacteria Bacteria 43.1 0.0143   NR HAR37047.1 1978231 g19782 i0 32.2 1.82474226804124 59 40 91.2 0 12 188 254 312 HAR37047.1 hypothetical protein [Acidobacteriota bacterium] diamond 354 43.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31341171 31341171 PRJNA515078_P_NODE_4496_length_453_cov_2.704327_g4264_i0 PRJNA515078 4496 453 2.704327 12.25060131 Geothrix sp. 1962974 Bacteria Bacteria 122 6.759999999999999e-31   NR HJW72493.1 1962974 g4264 i0 46 5.32450331125828 137 74 90.7 0 451 41 87 223 HJW72493.1 DUF1015 domain-containing protein [Geothrix sp.] diamond 2412 122 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Geothrix Geothrix sp.
31483294 31483294 PRJNA515078_P_NODE_26596_length_169_cov_0.886364_g26363_i0 PRJNA515078 26596 169 0.886364 1.49795516 Pseudomonadati 3379134 Bacteria Bacteria 74.7 6.08e-14   NR HBL29615.1 1978231 g26363 i0 87.2 4.8284023668639096 39 5 69.2 0 168 52 341 379 HBL29615.1 phosphatidylserine decarboxylase [Acidobacteriota bacterium] diamond 816 74.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31735909 31735909 PRJNA515078_P_NODE_31517_length_156_cov_1.386555_g31284_i0 PRJNA515078 31517 156 1.386555 2.1630258 Bacteria 2 Bacteria Bacteria 50.4 1.59e-5   NR MEM7248043.1 1978231 g31284 i0 48 2.94230769230769 50 26 96.2 0 155 6 132 181 MEM7248043.1 DUF4397 domain-containing protein [Acidobacteriota bacterium] diamond 459 50.8 0.992125984251969 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31783805 31783805 PRJNA515078_P_NODE_22817_length_182_cov_1.068966_g22584_i0 PRJNA515078 22817 182 1.068966 1.94551812 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 74.7 8.79e-14   NR HYT66950.1 2910147 g22584 i0 61.7 1.96153846153846 60 22 97.3 1 1 177 244 303 HYT66950.1 DUF4394 domain-containing protein [Vicinamibacterales bacterium] diamond 357 74.7 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
32195296 32195296 PRJNA515078_P_NODE_5198_length_417_cov_2.073684_g4965_i0 PRJNA515078 5198 417 2.073684 8.64726228 Acidobacteriota bacterium 1978231 Bacteria Bacteria 59.7 2.72e-7   NR MBX3265733.1 1978231 g4965 i0 34.8 1.27338129496403 89 52 61.2 4 377 123 146 232 MBX3265733.1 hypothetical protein [Acidobacteriota bacterium] diamond 531 59.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32606373 32606373 PRJNA515078_P_NODE_1860_length_715_cov_2.657817_g1679_i0 PRJNA515078 1860 715 2.657817 19.00339155 Edaphobacter sp. 1934404 Bacteria Bacteria 145 1.7e-39   NR WP_299379946.1 1934404 g1679 i0 51 1.86713286713287 149 67 61.3 3 132 569 36 181 WP_299379946.1 lipocalin family protein [Edaphobacter sp.] diamond 1335 145 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter sp.
32905003 32905003 PRJNA515078_P_NODE_23100_length_180_cov_2.181818_g22867_i0 PRJNA515078 23100 180 2.181818 3.9272724 Bacteria 2 Bacteria Bacteria 48.5 1.52e-4   NR HEX8817215.1 2282142 g22867 i0 57.4 3 47 18 75 1 43 177 316 362 HEX8817215.1 hypothetical protein [Terriglobales bacterium] diamond 540 48.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;