RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA515078", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 5 ✖

tax_kingdom 1

  • Fungi · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA515078 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15789493 15789493 PRJNA515078_P_NODE_1573_length_776_cov_7.005413_g1407_i0 PRJNA515078 1573 776 7.005413 54.36200488 Eukaryota 2759 Fungi Fungi 419 2.07e-146   NR EPZ33659.1 988480 g1407 i0 78 23.3002577319588 250 55 96.6 0 765 16 1 250 EPZ33659.1 60S ribosomal protein L8 [Rozella allomycis CSF55] diamond 18081 421 0.995249406175772 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
29839827 29839827 PRJNA515078_P_NODE_19951_length_194_cov_1.783439_g19718_i0 PRJNA515078 19951 194 1.783439 3.45987166 Eukaryota 2759 Fungi Fungi 77.4 3.02e-15   NR EPZ34692.1 988480 g19718 i0 65.1 4.70103092783505 63 21 95.9 1 187 2 190 252 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 912 77.8 0.994858611825193 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30218867 30218867 PRJNA515078_P_NODE_17892_length_206_cov_1.349112_g17659_i0 PRJNA515078 17892 206 1.349112 2.77917072 root 1 Root_unresolved Root_unresolved 49.3 1.62e-5   NR EPZ32165.1 988480 g17659 i0 82.6 1.35436893203884 23 4 33.5 0 204 136 77 99 EPZ32165.1 Dynein light chain roadblock-type 2 [Rozella allomycis CSF55] diamond 279 49.3 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
31088226 31088226 PRJNA515078_P_NODE_27735_length_165_cov_1.828125_g27502_i0 PRJNA515078 27735 165 1.828125 3.01640625 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 42.4 0.00661   NR PJF18805.1 1246581 g27502 i0 63.6 0.6 33 12 60 0 164 66 65 97 PJF18805.1 40S ribosomal protein S24 [Paramicrosporidium saccamoebae] diamond 99 42.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
32669293 32669293 PRJNA515078_P_NODE_6700_length_361_cov_2.401235_g6467_i0 PRJNA515078 6700 361 2.401235 8.66845835 Rozella allomycis CSF55 988480 Fungi Fungi 88.2 1.17e-19   NR EPZ33523.1 988480 g6467 i0 57 1.31301939058172 79 34 65.7 0 360 124 45 123 EPZ33523.1 Ribosomal protein L14 domain-containing protein [Rozella allomycis CSF55] diamond 474 88.2 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;