RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where bioproject = "PRJNA515078", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 13 ✖

tax_kingdom 1

  • Fungi · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA515078 · 13 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1761957 1761957 PRJNA515078_P_NODE_10922_length_272_cov_1.161702_g10689_i0 PRJNA515078 10922 272 1.161702 3.15982944 Fungi 4751 Fungi Fungi 92.8 3.88e-22   NR KAI9221418.1 64508 g10689 i0 58.4 16.5441176470588 77 32 84.9 0 3 233 34 110 KAI9221418.1 60S ribosomal protein L30 [Blastocladiella britannica] diamond 4500 92.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
6864507 6864507 PRJNA515078_P_NODE_1126_length_910_cov_6.187858_g984_i0 PRJNA515078 1126 910 6.187858 56.3095078 Fungi 4751 Fungi Fungi 361 6.25e-122   NR KAI9223593.1 64508 g984 i0 65.2 13.4769230769231 296 100 97.6 1 905 18 3 295 KAI9223593.1 hypothetical protein BC828DRAFT_403026 [Blastocladiella britannica] diamond 12264 363 0.994490358126722 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
7489017 7489017 PRJNA515078_P_NODE_1746_length_736_cov_5.127325_g1568_i0 PRJNA515078 1746 736 5.127325 37.737112 Allomyces arbusculus 64504 Fungi Fungi 278 3.46e-91   NR KAJ3366916.1 64504 g1568 i0 73.3 0.778532608695652 191 51 77.9 0 7 579 1 191 KAJ3366916.1 40S ribosomal protein S6 [Allomyces arbusculus] diamond 573 278 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
10690575 10690575 PRJNA515078_P_NODE_1749_length_735_cov_3.273639_g1571_i0 PRJNA515078 1749 735 3.273639 24.06124665 Allomyces arbusculus 64504 Fungi Fungi 245 3.76e-78   NR KAJ3366916.1 64504 g1571 i0 71.8 1.42857142857143 170 48 69.4 0 69 578 22 191 KAJ3366916.1 40S ribosomal protein S6 [Allomyces arbusculus] diamond 1050 245 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
26649239 26649239 PRJNA515078_P_NODE_4421_length_457_cov_4.776190_g4189_i0 PRJNA515078 4421 457 4.77619 21.8271883 Fungi 4751 Fungi Fungi 145 2.08e-41   NR KAI9159512.1 1313167 g4189 i0 57 6.03938730853392 149 57 94.5 2 6 437 1 147 KAI9159512.1 60S ribosomal protein L24 [Blastocladiella emersonii ATCC 22665] diamond 2760 145 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
28371954 28371954 PRJNA515078_P_NODE_28886_length_162_cov_1.560000_g28653_i0 PRJNA515078 28886 162 1.56 2.5272 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 52 2.61e-6   NR KAI9183207.1 1313167 g28653 i0 47.5 0.740740740740741 40 21 74.1 0 39 158 127 166 KAI9183207.1 hypothetical protein H9P43_004124 [Blastocladiella emersonii ATCC 22665] diamond 120 52 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
28656330 28656330 PRJNA515078_P_NODE_32087_length_155_cov_1.313559_g31854_i0 PRJNA515078 32087 155 1.313559 2.03601645 Paraphysoderma sedebokerense 1500003 Fungi Fungi 77.8 4.88e-15   NR KAI9145646.1 1500003 g31854 i0 62 0.967741935483871 50 18 96.8 1 6 155 586 634 KAI9145646.1 glycoside hydrolase superfamily [Paraphysoderma sedebokerense] diamond 150 77.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
29161637 29161637 PRJNA515078_P_NODE_20409_length_192_cov_1.490323_g20176_i0 PRJNA515078 20409 192 1.490323 2.86142016 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 71.2 4.95e-13   NR KAI9179452.1 1313167 g20176 i0 48.3 0.9375 60 31 93.8 0 6 185 71 130 KAI9179452.1 hypothetical protein H9P43_004775 [Blastocladiella emersonii ATCC 22665] diamond 180 71.2 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
31103471 31103471 PRJNA515078_P_NODE_6475_length_368_cov_2.429003_g6242_i0 PRJNA515078 6475 368 2.429003 8.93873104 Fungi 4751 Fungi Fungi 121 5.47e-33   NR KAI9183534.1 1313167 g6242 i0 56.7 2.35597826086957 97 42 79.1 0 60 350 14 110 KAI9183534.1 Glutaredoxin [Blastocladiella emersonii ATCC 22665] diamond 867 121 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
32037087 32037087 PRJNA515078_P_NODE_31938_length_155_cov_1.644068_g31705_i0 PRJNA515078 31938 155 1.644068 2.5483054 Blastocladiella britannica 64508 Fungi Fungi 56.2 1.93e-7   NR KAI9219926.1 64508 g31705 i0 71 2.34193548387097 31 9 60 0 3 95 456 486 KAI9219926.1 actin family [Blastocladiella britannica] diamond 363 56.2 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
32147434 32147434 PRJNA515078_P_NODE_10698_length_275_cov_1.789916_g10465_i0 PRJNA515078 10698 275 1.789916 4.922269 Eukaryota 2759 Fungi Fungi 58.5 9.99e-8   NR KNE60834.1 578462 g10465 i0 35.2 4.62545454545455 88 50 93.8 3 2 259 175 257 KNE60834.1 hypothetical protein AMAG_06600 [Allomyces macrogynus ATCC 38327] diamond 1272 58.9 0.99320882852292 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
32195293 32195293 PRJNA515078_P_NODE_33098_length_153_cov_1.043103_g32865_i0 PRJNA515078 33098 153 1.043103 1.59594759 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 42.7 0.0114   NR KNE57986.1 578462 g32865 i0 45 1.45098039215686 40 22 78.4 0 144 25 422 461 KNE57986.1 hypothetical protein AMAG_18362 [Allomyces macrogynus ATCC 38327] diamond 222 42.7 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
32747657 32747657 PRJNA515078_P_NODE_20000_length_194_cov_1.484076_g19767_i0 PRJNA515078 20000 194 1.484076 2.87910744 Eukaryota 2759 Fungi Fungi 60.5 1.06e-8   NR KAI9221620.1 64508 g19767 i0 51.7 1.91752577319588 58 28 89.7 0 2 175 315 372 KAI9221620.1 hypothetical protein BC828DRAFT_380556 [Blastocladiella britannica] diamond 372 60.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;