RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA515078", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 6 ✖

tax_kingdom 1

  • Bacillati · 6 ✖

bioproject 1

  • PRJNA515078 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26649230 26649230 PRJNA515078_P_NODE_18321_length_203_cov_1.409639_g18088_i0 PRJNA515078 18321 203 1.409639 2.86156717 Armatimonadota 67819 Bacteria Bacteria 65.9 9.78e-11   NR HXG23262.1 2282151 g18088 i0 43.3 6.82758620689655 67 38 99 0 201 1 80 146 HXG23262.1 S1/P1 nuclease [Chthonomonadales bacterium] diamond 1386 65.9 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
26760554 26760554 PRJNA515078_P_NODE_11921_length_258_cov_1.687783_g11688_i0 PRJNA515078 11921 258 1.687783 4.35448014 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 73.2 1.01e-14   NR MBX3097920.1 2682144 g11688 i0 62.9 0.720930232558139 62 20 68.6 2 181 5 18 79 MBX3097920.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 186 73.2 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
29382472 29382472 PRJNA515078_P_NODE_7749_length_331_cov_2.653061_g7516_i0 PRJNA515078 7749 331 2.653061 8.78163191 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 50.4 1.89e-5   NR MBX3097920.1 2682144 g7516 i0 76.5 0.308157099697885 34 6 29 1 330 235 53 86 MBX3097920.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 102 50.4 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
29524132 29524132 PRJNA515078_P_NODE_10810_length_273_cov_2.372881_g10577_i0 PRJNA515078 10810 273 2.372881 6.47796513 FCB group 1783270 Bacteria Bacteria 64.3 8.39e-10   NR MEZ0327545.1 1936159 g10577 i0 43.1 11.3406593406593 65 36 70.3 1 271 80 70 134 MEZ0327545.1 hypothetical protein [Fimbriimonas sp.] diamond 3096 64.3 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
30867005 30867005 PRJNA515078_P_NODE_24474_length_175_cov_2.268116_g24241_i0 PRJNA515078 24474 175 2.268116 3.969203 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 41.6 0.0387   NR MBX3113767.1 2682144 g24241 i0 36.8 0.977142857142857 57 32 90.9 1 168 10 70 126 MBX3113767.1 NADH:flavin oxidoreductase/NADH oxidase [Fimbriimonadaceae bacterium] diamond 171 41.6 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
31752188 31752188 PRJNA515078_P_NODE_12657_length_250_cov_1.098592_g12424_i0 PRJNA515078 12657 250 1.098592 2.74648 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 61.6 1.23e-10   NR MBX3097919.1 2682144 g12424 i0 55.1 0.588 49 22 58.8 0 8 154 1 49 MBX3097919.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 147 61.6 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;