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contig_metadata

34 rows where bioproject = "PRJNA515078", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 34 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 34 ✖

bioproject 1

  • PRJNA515078 · 34 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3037942 3037942 PRJNA515078_P_NODE_30503_length_158_cov_1.925620_g30270_i0 PRJNA515078 30503 158 1.92562 3.0424796 PVC group 1783257 Bacteria Bacteria 95.1 1.17e-21   NR MCL5946276.1 2026780 g30270 i0 84.3 8.84810126582278 51 8 96.8 0 158 6 284 334 MCL5946276.1 type I glyceraldehyde-3-phosphate dehydrogenase [Planctomycetota bacterium] diamond 1398 95.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
4313703 4313703 PRJNA515078_P_NODE_15904_length_219_cov_1.714286_g15671_i0 PRJNA515078 15904 219 1.714286 3.75428634 Sedimentisphaera salicampi 1941349 Bacteria Bacteria 52.8 0.019   NTclustered gi|1188493932|gb|CP021023.1| 1941349 g15671 i0 100 0.127853881278539 28 0 13 0 172 199 416787 416814 Sedimentisphaera salicampi strain ST-PulAB-D4 chromosome, complete genome blastn 28 52.8 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Sedimentisphaerales Sedimentisphaeraceae Sedimentisphaera Sedimentisphaera salicampi
6864712 6864712 PRJNA515078_P_NODE_6066_length_383_cov_1.820809_g5833_i0 PRJNA515078 6066 383 1.820809 6.97369847 Bacteria 2 Bacteria Bacteria 172 6.489999999999999e-52   NR MEZ6197502.1 2026780 g5833 i0 72.2 7.57441253263708 108 30 84.6 0 383 60 84 191 MEZ6197502.1 Fe-Mn family superoxide dismutase [Planctomycetota bacterium] diamond 2901 173 0.994219653179191 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
9414940 9414940 PRJNA515078_P_NODE_18708_length_201_cov_0.951220_g18475_i0 PRJNA515078 18708 201 0.95122 1.9119522 Phycisphaeraceae bacterium 2026777 Bacteria Bacteria 309 9.39e-80   NTclustered gi|1927958621|gb|CP054186.1| 2026777 g18475 i0 94.924 79.452736318408 197 10 98 0 5 201 1866403 1866207 MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome blastn 15970 309 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales Phycisphaeraceae   Phycisphaeraceae bacterium
23439310 23439310 PRJNA515078_P_NODE_27779_length_165_cov_1.523438_g27546_i0 PRJNA515078 27779 165 1.523438 2.5136727 Rhodopirellula 265488 Bacteria Bacteria 92.8 1.57e-20   NR MBL98744.1 2024855 g27546 i0 81.5 16.6909090909091 54 10 98.2 0 163 2 280 333 MBL98744.1 ADP-forming succinate--CoA ligase subunit beta [Rhodopirellula sp.] diamond 2754 93.2 0.995708154506438 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Rhodopirellula Rhodopirellula sp.
26649237 26649237 PRJNA515078_P_NODE_301_length_1524_cov_10.117014_g258_i0 PRJNA515078 301 1524 10.117014 154.18329336 Bacteria 2 Bacteria Bacteria 69.3 3.57e-8   NR WP_020468205.1 360055 g258 i0 39.9 2.0492125984252 138 56 23 6 1522 1172 1735 1866 WP_020468205.1 beta strand repeat-containing protein [Zavarzinella formosa] diamond 3123 69.3 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae Zavarzinella Zavarzinella formosa
26665417 26665417 PRJNA515078_P_NODE_24181_length_176_cov_2.762590_g23948_i0 PRJNA515078 24181 176 2.76259 4.8621584 Planctomycetota bacterium 2026780 Bacteria Bacteria 42.4 0.0106   NR TET33278.1 2026780 g23948 i0 45.2 0.715909090909091 42 23 71.6 0 25 150 100 141 TET33278.1 MAG: hypothetical protein E3J72_17015 [Planctomycetota bacterium] diamond 126 42.4 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
26697246 26697246 PRJNA515078_P_NODE_29921_length_160_cov_0.951220_g29688_i0 PRJNA515078 29921 160 0.95122 1.521952 Planctomycetota bacterium 2026780 Bacteria Bacteria 89 5.59e-19   NR MCZ7647244.1 2026780 g29688 i0 73.6 1.9875 53 14 99.4 0 159 1 321 373 MCZ7647244.1 saccharopine dehydrogenase NADP-binding domain-containing protein [Planctomycetota bacterium] diamond 318 89 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
26776246 26776246 PRJNA515078_P_NODE_27021_length_167_cov_1.800000_g26788_i0 PRJNA515078 27021 167 1.8 3.006 Pseudomonadati 3379134 Bacteria Bacteria 54.7 8.13e-7   NR WP_145344827.1 1930277 g26788 i0 50.9 4.88622754491018 55 27 98.8 0 167 3 1593 1647 WP_145344827.1 hypothetical protein [Rosistilla ulvae] diamond 816 54.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Rosistilla Rosistilla ulvae
27013845 27013845 PRJNA515078_P_NODE_29362_length_161_cov_1.258065_g29129_i0 PRJNA515078 29362 161 1.258065 2.02548465 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 46.6 3.59e-4   NR MCA8998614.1 2026779 g29129 i0 46.9 2.2360248447205 49 26 91.3 0 8 154 52 100 MCA8998614.1 30S ribosomal protein S9 [Planctomycetaceae bacterium] diamond 360 46.6 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
27123866 27123866 PRJNA515078_P_NODE_32722_length_154_cov_1.000000_g32489_i0 PRJNA515078 32722 154 1 1.54 Bacteria 2 Bacteria Bacteria 85.9 6.69e-18   NR MBM3968716.1 2026780 g32489 i0 82 4.87012987012987 50 9 97.4 0 152 3 634 683 MBM3968716.1 M3 family metallopeptidase [Planctomycetota bacterium] diamond 750 85.9 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27629838 27629838 PRJNA515078_P_NODE_14824_length_228_cov_1.429319_g14591_i0 PRJNA515078 14824 228 1.429319 3.25884732 Stieleria 2795973 Bacteria Bacteria 44.7 0.00648   NR WP_145389156.1 2527979 g14591 i0 45 2.10526315789474 40 22 52.6 0 223 104 1115 1154 WP_145389156.1 ATP-binding protein [Stieleria neptunia] diamond 480 44.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Stieleria Stieleria neptunia
27693061 27693061 PRJNA515078_P_NODE_5204_length_417_cov_1.947368_g4971_i0 PRJNA515078 5204 417 1.947368 8.12052456 Pseudomonadati 3379134 Bacteria Bacteria 47.4 0.00503   NR MFT6079578.1 2026780 g4971 i0 27.5 1.72661870503597 120 74 80.6 2 14 349 99 213 MFT6079578.1 hypothetical protein [Planctomycetota bacterium] diamond 720 47.4 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27709468 27709468 PRJNA515078_P_NODE_6004_length_385_cov_1.994253_g5771_i0 PRJNA515078 6004 385 1.994253 7.67787405 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 88.2 2.46e-17   NR MEZ6056578.1 2026779 g5771 i0 48.2 0.857142857142857 110 54 84.2 2 61 384 1360 1468 MEZ6056578.1 Ig-like domain-containing protein [Planctomycetaceae bacterium] diamond 330 88.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
27803873 27803873 PRJNA515078_P_NODE_6104_length_381_cov_3.563953_g5871_i0 PRJNA515078 6104 381 3.563953 13.57866093 Planctomycetota bacterium 2026780 Bacteria Bacteria 45.1 0.0252   NR HVS09816.1 2026780 g5871 i0 31.3 1.41732283464567 99 53 74 4 10 291 167 255 HVS09816.1 hypothetical protein [Planctomycetota bacterium] diamond 540 45.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28213951 28213951 PRJNA515078_P_NODE_6146_length_380_cov_1.376093_g5913_i0 PRJNA515078 6146 380 1.376093 5.2291534 Planctomycetia bacterium 2052181 Bacteria Bacteria 63.2 1.23e-8   NR MCX7419344.1 2052181 g5913 i0 46.7 0.844736842105263 107 48 82.9 3 377 63 314 413 MCX7419344.1 trypsin-like serine protease [Planctomycetia bacterium] diamond 321 63.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia       Planctomycetia bacterium
28371947 28371947 PRJNA515078_P_NODE_22386_length_183_cov_1.691781_g22153_i0 PRJNA515078 22386 183 1.691781 3.09595923 Paludisphaera soli 2712865 Bacteria Bacteria 46.2 9.7e-4   NR WP_165251326.1 2712865 g22153 i0 52.9 3.81967213114754 51 24 83.6 0 182 30 306 356 WP_165251326.1 SMP-30/gluconolactonase/LRE family protein [Paludisphaera soli] diamond 699 46.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Paludisphaera Paludisphaera soli
28435227 28435227 PRJNA515078_P_NODE_13026_length_245_cov_3.024038_g12793_i0 PRJNA515078 13026 245 3.024038 7.4088931 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 42.7 0.0371   NR HID75252.1 2026779 g12793 i0 33.3 0.771428571428571 63 42 77.1 0 40 228 78 140 HID75252.1 glycosyltransferase [Planctomycetaceae bacterium] diamond 189 42.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
28608476 28608476 PRJNA515078_P_NODE_8267_length_319_cov_1.382979_g8034_i0 PRJNA515078 8267 319 1.382979 4.41170301 Pseudomonadati 3379134 Bacteria Bacteria 76.6 6.62e-14   NR MAG94705.1 2026779 g8034 i0 42.9 1.84326018808777 98 51 91.2 3 319 29 122 215 MAG94705.1 hypothetical protein [Planctomycetaceae bacterium] diamond 588 76.6 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
28829381 28829381 PRJNA515078_P_NODE_848_length_1031_cov_13.336016_g733_i0 PRJNA515078 848 1031 13.336016 137.49432496 Pseudomonadati 3379134 Bacteria Bacteria 71.6 1.47e-9   NR NOT01860.1 2052180 g733 i0 29 1.8011639185257 200 134 57 6 947 360 26 221 NOT01860.1 DUF4215 domain-containing protein [Phycisphaerales bacterium] diamond 1857 72 0.994444444444444 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
29287596 29287596 PRJNA515078_P_NODE_24169_length_176_cov_3.604317_g23936_i0 PRJNA515078 24169 176 3.604317 6.34359792 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 72.8 1.22e-14   NR MDR0390349.1 2026779 g23936 i0 63.8 2.91477272727273 58 19 98.9 1 175 2 5 60 MDR0390349.1 RidA family protein [Planctomycetaceae bacterium] diamond 513 72.8 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
29508638 29508638 PRJNA515078_P_NODE_32250_length_155_cov_0.991525_g32017_i0 PRJNA515078 32250 155 0.991525 1.53686375 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 41.2 0.0401   NR MFN8855787.1 2026779 g32017 i0 47.5 1.54838709677419 40 21 77.4 0 35 154 933 972 MFN8855787.1 cadherin domain-containing protein [Planctomycetaceae bacterium] diamond 240 41.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
29824293 29824293 PRJNA515078_P_NODE_27031_length_167_cov_1.800000_g26798_i0 PRJNA515078 27031 167 1.8 3.006 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 48.9 8.96e-5   NR MFO1006751.1 2026779 g26798 i0 47.3 0.988023952095808 55 27 97 2 166 5 2075 2128 MFO1006751.1 Ig-like domain-containing protein [Planctomycetaceae bacterium] diamond 165 48.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
29887781 29887781 PRJNA515078_P_NODE_9131_length_302_cov_1.271698_g8898_i0 PRJNA515078 9131 302 1.271698 3.84052796 Planctomycetota bacterium 2026780 Bacteria Bacteria 51.6 6e-5   NR MBI3835013.1 2026780 g8898 i0 60.5 0.377483443708609 38 15 37.7 0 289 176 1154 1191 MBI3835013.1 hypothetical protein [Planctomycetota bacterium] diamond 114 51.6 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30014094 30014094 PRJNA515078_P_NODE_27571_length_166_cov_1.201550_g27338_i0 PRJNA515078 27571 166 1.20155 1.994573 Phycisphaerae bacterium 2026778 Bacteria Bacteria 52.4 5.29e-6   NR NUQ48160.1 2026778 g27338 i0 56.8 2.24096385542169 44 19 79.5 0 166 35 763 806 NUQ48160.1 alanine--tRNA ligase [Phycisphaerae bacterium] diamond 372 52.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
30045430 30045430 PRJNA515078_P_NODE_1891_length_709_cov_3.000000_g1707_i0 PRJNA515078 1891 709 3 21.27 Planctomycetota bacterium 2026780 Bacteria Bacteria 72.4 1.46e-10   NR MEY2612968.1 2026780 g1707 i0 37 0.53737658674189 127 72 50.8 4 638 279 212 337 MEY2612968.1 Large cysteine-rich periplasmic protein omcB precursor [Planctomycetota bacterium] diamond 381 72.4 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30425155 30425155 PRJNA515078_P_NODE_10813_length_273_cov_2.305085_g10580_i0 PRJNA515078 10813 273 2.305085 6.29288205 Pirellulales bacterium 2715253 Bacteria Bacteria 90.9 3.84e-21   NR MEO1990730.1 2715253 g10580 i0 58.7 5.02197802197802 63 26 69.2 0 69 257 2 64 MEO1990730.1 TspO/MBR family protein [Pirellulales bacterium] diamond 1371 90.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales     Pirellulales bacterium
30819292 30819292 PRJNA515078_P_NODE_15334_length_224_cov_1.347594_g15101_i0 PRJNA515078 15334 224 1.347594 3.01861056 Pseudomonadati 3379134 Bacteria Bacteria 57.4 2.02e-7   NR MDW8373813.1 2026780 g15101 i0 51.6 5.51785714285714 64 31 85.7 0 10 201 944 1007 MDW8373813.1 Calx-beta domain-containing protein [Planctomycetota bacterium] diamond 1236 57.8 0.993079584775087 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31008846 31008846 PRJNA515078_P_NODE_994_length_958_cov_12.993485_g867_i0 PRJNA515078 994 958 12.993485 124.4775863 Planctomycetia 203683 Bacteria Bacteria 73.9 1.65e-10   NR MFM7931657.1 117 g867 i0 41.3 1.18371607515658 126 69 38.8 3 291 662 14 136 MFM7931657.1 SdrD B-like domain-containing protein [Pirellula sp.] diamond 1134 73.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Pirellula Pirellula sp.
31862411 31862411 PRJNA515078_P_NODE_2517_length_615_cov_4.235294_g2307_i0 PRJNA515078 2517 615 4.235294 26.0470581 Planctomycetota 203682 Bacteria Bacteria 110 5.3200000000000006e-27   NR NLU19217.1 2026778 g2307 i0 48.7 2.75609756097561 113 58 55.1 0 382 44 10 122 NLU19217.1 tryptophan-rich sensory protein [Phycisphaerae bacterium] diamond 1695 110 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
32132142 32132142 PRJNA515078_P_NODE_16858_length_212_cov_2.005714_g16625_i0 PRJNA515078 16858 212 2.005714 4.25211368 Planctomycetota bacterium 2026780 Bacteria Bacteria 42 0.0369   NR MDR2392510.1 2026780 g16625 i0 55.6 0.382075471698113 27 12 38.2 0 15 95 171 197 MDR2392510.1 TerD family protein [Planctomycetota bacterium] diamond 81 42 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32290563 32290563 PRJNA515078_P_NODE_1799_length_725_cov_2.072674_g1618_i0 PRJNA515078 1799 725 2.072674 15.0268865 Planctomycetota bacterium 2026780 Bacteria Bacteria 223 4.27e-68   NR REJ85612.1 2026780 g1618 i0 49.6 0.926896551724138 224 110 91.4 1 719 57 125 348 REJ85612.1 MAG: homocysteine S-methyltransferase family protein [Planctomycetota bacterium] diamond 672 223 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32448632 32448632 PRJNA515078_P_NODE_2559_length_607_cov_25.917544_g2346_i0 PRJNA515078 2559 607 25.917544 157.31949208 Rhodopirellula 265488 Bacteria Bacteria 127 5.95e-34   NR WP_047812678.1 265488 g2346 i0 48.1 0.637561779242175 129 67 63.8 0 396 10 2 130 WP_047812678.1 MULTISPECIES: TspO/MBR family protein [Rhodopirellula] diamond 387 127 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Rhodopirellula  
32480206 32480206 PRJNA515078_P_NODE_23999_length_177_cov_1.557143_g23766_i0 PRJNA515078 23999 177 1.557143 2.75614311 Planctomycetota bacterium 2026780 Bacteria Bacteria 79.3 1.82e-15   NR MAB80992.1 2026780 g23766 i0 63.2 4.8135593220339 57 21 96.6 0 175 5 307 363 MAB80992.1 peptidase M20 [Planctomycetota bacterium] diamond 852 79.3 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;