RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA515078", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 3 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 3 ✖

bioproject 1

  • PRJNA515078 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29540153 29540153 PRJNA515078_P_NODE_22490_length_183_cov_1.321918_g22257_i0 PRJNA515078 22490 183 1.321918 2.41910994 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 53.5 2.69e-6   NR MBU2437270.1 2035772 g22257 i0 40 8.67213114754098 65 35 100 2 183 1 651 715 MBU2437270.1 PKD domain-containing protein [Candidatus Omnitrophota bacterium] diamond 1587 53.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29887764 29887764 PRJNA515078_P_NODE_27491_length_166_cov_1.209302_g27258_i0 PRJNA515078 27491 166 1.209302 2.00744132 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 67 3.48e-11   NR MBU0469029.1 2035772 g27258 i0 56.9 2.71084337349398 51 22 92.2 0 154 2 27 77 MBU0469029.1 serpin family protein [Candidatus Omnitrophota bacterium] diamond 450 67 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32795056 32795056 PRJNA515078_P_NODE_31240_length_157_cov_1.091667_g31007_i0 PRJNA515078 31240 157 1.091667 1.71391719 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 42 0.0215   NR MBI3615045.1 2035772 g31007 i0 35.6 0.859872611464968 45 29 86 0 9 143 2810 2854 MBI3615045.1 DUF2341 domain-containing protein [Candidatus Omnitrophota bacterium] diamond 135 42 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;