RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA515078", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA515078 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26855910 26855910 PRJNA515078_P_NODE_28421_length_163_cov_2.150794_g28188_i0 PRJNA515078 28421 163 2.150794 3.50579422 Minisyncoccota bacterium 2053589 Bacteria Bacteria 45.4 4.16e-4   NR MDR3582048.1 2053589 g28188 i0 43.4 0.975460122699387 53 30 97.5 0 161 3 50 102 MDR3582048.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 159 45.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27108575 27108575 PRJNA515078_P_NODE_21042_length_189_cov_1.427632_g20809_i0 PRJNA515078 21042 189 1.427632 2.69822448 Minisyncoccota bacterium 2053589 Bacteria Bacteria 53.9 1.98e-6   NR MDR3549369.1 2053589 g20809 i0 47.5 2.01587301587302 61 27 90.5 2 176 6 159 218 MDR3549369.1 phospholipid scramblase-related protein [Candidatus Paceibacterota bacterium] diamond 381 53.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;