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contig_metadata

16 rows where bioproject = "PRJNA513467" and tax_superkingdom = "Viruses"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Viruses · 16 ✖

bioproject 1

  • PRJNA513467 · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
486637 486637 PRJNA513467_S_NODE_3741_length_200_cov_2.024540_g3718_i0 PRJNA513467 3741 200 2.02454 4.04908 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.017   NTclustered gi|2054548793|tpg|BK048005.1| 2832643 g3718 i0 100 0.14 28 0 14 0 171 198 12018 12045 MAG TPA_asm: Caudoviricetes sp. isolate ct5Sd10, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
486658 486658 PRJNA513467_S_NODE_5481_length_175_cov_1.586957_g5458_i0 PRJNA513467 5481 175 1.586957 2.77717475 Norway luteo-like virus 4 2034334 Viruses Viruses 270 3.739999999999999e-68   NTclustered gi|1240393784|gb|MF141071.1| 2034334 g5458 i0 96.341 3.76 164 6 94 0 3 166 2018 1855 Norway luteo-like virus 4 isolate NOR/S5/Kilen/2014 RNA-dependent RNA-polymerase gene, partial cds blastn 658 270 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Norway luteo-like virus 4
1761857 1761857 PRJNA513467_S_NODE_2382_length_235_cov_89.878788_g2359_i0 PRJNA513467 2382 235 89.878788 211.2151518 Betacoronavirus pandemicum 3418604 Viruses Viruses 75 4.49e-9   NTclustered gi|2565352131|emb|OY625234.1| 2697049 g2359 i0 94 16.4382978723404 50 2 21 1 185 233 23673 23722 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 3863 75 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
3037698 3037698 PRJNA513467_S_NODE_1203_length_306_cov_2.375465_g1180_i0 PRJNA513467 1203 306 2.375465 7.2689229 Norway luteo-like virus 4 2034334 Viruses Viruses 553 6.419999999999998e-153   NTclustered gi|1240393781|gb|MF141070.1| 2034334 g1180 i0 99.669 2.91830065359477 302 1 99 0 5 306 4522 4221 Norway luteo-like virus 4 isolate NOR/B1V/Tofte/2014 RNA-dependent RNA-polymerase and coat protein genes, complete cds blastn 893 553 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Norway luteo-like virus 4
5590504 5590504 PRJNA513467_S_NODE_4725_length_184_cov_2.387755_g4702_i0 PRJNA513467 4725 184 2.387755 4.3934692 Plant associated sequivirus 3 2950831 Viruses Viruses 261 2.39e-65   NTclustered gi|2273760649|gb|OL472184.1| 2950831 g4702 i0 92.391 5.45108695652174 184 13 99 1 2 184 10123 9940 MAG: Plant associated sequivirus 3 isolate PLE20SW, complete genome blastn 1003 261 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Sequivirus Plant associated sequivirus 3
10690438 10690438 PRJNA513467_S_NODE_2809_length_221_cov_2.505435_g2786_i0 PRJNA513467 2809 221 2.505435 5.53701135 Allexivirus ecsallii 3433712 Viruses Viruses 375 1.0199999999999998e-99   NTclustered gi|1722561625|gb|MN059411.1| 150284 g2786 i0 97.285 93.5927601809955 221 6 100 0 1 221 7874 7654 Garlic virus X isolate G40, complete genome blastn 20684 375 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Allexivirus Allexivirus ecsallii
10690474 10690474 PRJNA513467_S_NODE_549_length_421_cov_2.140625_g526_i0 PRJNA513467 549 421 2.140625 9.01203125 Allexivirus ecsallii 3433712 Viruses Viruses 656 0   NTclustered gi|410131120|gb|JQ807994.1| 150284 g526 i0 94.774 89.1615201900238 421 22 100 0 1 421 7948 8368 Garlic virus X isolate SW3, complete genome blastn 37537 656 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Allexivirus Allexivirus ecsallii
11965421 11965421 PRJNA513467_S_NODE_3150_length_213_cov_1.363636_g3127_i0 PRJNA513467 3150 213 1.363636 2.90454468 Fabavirus alphaviciae 3047701 Viruses Viruses 298 2.18e-76   NTclustered gi|2904963151|gb|PQ789800.1| 50817 g3127 i0 91.981 13.3990610328638 212 17 99 0 1 212 5784 5573 Broad bean wilt virus 1 isolate QLD-5612 segment RNA1 polyprotein gene, complete cds blastn 2854 298 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Fabavirus Fabavirus alphaviciae
11965447 11965447 PRJNA513467_S_NODE_530_length_426_cov_5.053985_g507_i0 PRJNA513467 530 426 5.053985 21.5299761 Erysiphe necator associated deltaflexivirus 4 2743097 Viruses Viruses 754 0   NTclustered gi|2288523299|gb|ON811606.1| 2743097 g507 i0 100 3.13145539906103 408 0 96 0 19 426 7113 6706 MAG: Erysiphe necator associated deltaflexivirus 4 isolate TIGMIC_2, complete genome blastn 1334 754 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae Deltaflexivirus Erysiphe necator associated deltaflexivirus 4
14515608 14515608 PRJNA513467_S_NODE_2852_length_220_cov_5.464481_g2829_i0 PRJNA513467 2852 220 5.464481 12.0218582 Norway luteo-like virus 4 2034334 Viruses Viruses 407 3.61e-109   NTclustered gi|1240393781|gb|MF141070.1| 2034334 g2829 i0 100 1 220 0 100 0 1 220 5759 5540 Norway luteo-like virus 4 isolate NOR/B1V/Tofte/2014 RNA-dependent RNA-polymerase and coat protein genes, complete cds blastn 220 407 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Norway luteo-like virus 4
18338336 18338336 PRJNA513467_S_NODE_3675_length_201_cov_2.548780_g3652_i0 PRJNA513467 3675 201 2.54878 5.1230478 Crogonang virus 69 3063080 Viruses Viruses 265 2.06e-66   NTclustered gi|2626079622|gb|OR270394.1| 3063080 g3652 i0 95.21 4.59203980099502 167 8 83 0 35 201 3122 2956 MAG: Crogonang virus 69 isolate CGH03 genomic sequence blastn 923 265 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Crogonang virus 69
18338389 18338389 PRJNA513467_S_NODE_7935_length_153_cov_1.793103_g7912_i0 PRJNA513467 7935 153 1.793103 2.74344759 Caudoviricetes sp. 2832643 Viruses Viruses 283 4.0799999999999995e-72   NTclustered gi|2906147942|gb|PQ646354.1| 2832643 g7912 i0 100 1 153 0 100 0 1 153 19584 19432 MAG: Caudoviricetes sp. isolate k127_298828 genomic sequence blastn 153 283 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
19612684 19612684 PRJNA513467_S_NODE_1476_length_284_cov_2.668016_g1453_i0 PRJNA513467 1476 284 2.668016 7.57716544 Ripabiq virus 3130194 Viruses Viruses 196 1.14e-45   NTclustered gi|2717319120|gb|PP172496.1| 3130194 g1453 i0 84.848 18.8908450704225 198 26 69 4 83 278 364 169 MAG: Ripabiq virus isolate DRCP1_k141_78731 genomic sequence blastn 5365 196 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripabiq virus
20237339 20237339 PRJNA513467_S_NODE_3836_length_198_cov_44.192547_g3813_i0 PRJNA513467 3836 198 44.192547 87.50124306 root 1 Root_unresolved Root_unresolved 316 5.51e-82   NTclustered gi|671698184|gb|KM192300.1| 10359 g3813 i0 95.455 102 198 9 100 0 1 198 39032 39229 Human herpesvirus 5 strain Merlin isolate RCMV1528, complete genome blastn 20196 316 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus humanbeta5
29193120 29193120 PRJNA513467_S_NODE_1369_length_292_cov_2.086275_g1346_i0 PRJNA513467 1369 292 2.086275 6.091923 Caudoviricetes sp. 2832643 Viruses Viruses 40.4 0.0365   NR XOS44195.1 2832643 g1346 i0 54.5 0.339041095890411 33 13 33.9 1 109 207 8 38 XOS44195.1 MAG: hypothetical protein MSP0939_64 [Caudoviricetes sp.] diamond 99 40.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29713138 29713138 PRJNA513467_S_NODE_6410_length_165_cov_2.742188_g6387_i0 PRJNA513467 6410 165 2.742188 4.5246102 Gamaleyavirus 1920753 Viruses Viruses 48.9 8.58e-5   NR DAE39455.1 38018 g6387 i0 51 3.81818181818182 51 25 92.7 0 164 12 122 172 DAE39455.1 MAG TPA: RNA polymerase [Bacteriophage sp.] diamond 630 48.9 1 Viruses               Bacteriophage sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;