contig_metadata
143 rows where bioproject = "PRJNA513467" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 486640 | 486640 | PRJNA513467_S_NODE_4081_length_194_cov_2.146497_g4058_i0 | PRJNA513467 | 4081 | 194 | 2.146497 | 4.16420418 | Acinetobacter baumannii | 470 | Bacteria | Bacteria | 353 | 4.1e-93 | NTclustered | gi|2289938066|gb|CP087335.1| | 470 | g4058 | i0 | 99.485 | 34.798969072165 | 194 | 1 | 100 | 0 | 1 | 194 | 3893674 | 3893481 | Acinetobacter baumannii strain DB053 chromosome, complete genome | blastn | 6751 | 353 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 486648 | 486648 | PRJNA513467_S_NODE_4761_length_184_cov_1.326531_g4738_i0 | PRJNA513467 | 4761 | 184 | 1.326531 | 2.44081704 | Acinetobacter johnsonii | 40214 | Bacteria | Bacteria | 340 | 2.99e-89 | NTclustered | gi|1995439409|gb|CP070866.1| | 40214 | g4738 | i0 | 100 | 26 | 184 | 0 | 100 | 0 | 1 | 184 | 1133572 | 1133389 | Acinetobacter johnsonii strain XY27 chromosome, complete genome | blastn | 4784 | 340 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 1110898 | 1110898 | PRJNA513467_S_NODE_4241_length_192_cov_1.006452_g4218_i0 | PRJNA513467 | 4241 | 192 | 1.006452 | 1.93238784 | Acinetobacter | 469 | Bacteria | Bacteria | 355 | 1.13e-93 | NTclustered | gi|1130057855|gb|CP019041.1| | 40215 | g4218 | i0 | 100 | 18.0052083333333 | 192 | 0 | 100 | 0 | 1 | 192 | 1320723 | 1320532 | Acinetobacter junii strain 65 chromosome, complete genome | blastn | 3457 | 355 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter junii | ||
| 1110899 | 1110899 | PRJNA513467_S_NODE_4261_length_191_cov_2.246753_g4238_i0 | PRJNA513467 | 4261 | 191 | 2.246753 | 4.29129823 | Escherichia | 561 | Bacteria | Bacteria | 353 | 4.02e-93 | NTclustered | gi|2841922414|gb|CP163901.1| | 562 | g4238 | i0 | 100 | 100 | 191 | 0 | 100 | 0 | 1 | 191 | 4068904 | 4068714 | Escherichia coli strain OXEC-129 chromosome, complete genome | blastn | 19100 | 353 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 1761917 | 1761917 | PRJNA513467_S_NODE_6522_length_164_cov_2.456693_g6499_i0 | PRJNA513467 | 6522 | 164 | 2.456693 | 4.02897652 | Escherichia coli | 562 | Bacteria | Bacteria | 303 | 3.42e-78 | NTclustered | gi|1114311496|gb|CP010231.1| | 562 | g6499 | i0 | 100 | 100 | 164 | 0 | 100 | 0 | 1 | 164 | 3130775 | 3130938 | Escherichia coli strain S30, complete genome | blastn | 16400 | 303 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 1761918 | 1761918 | PRJNA513467_S_NODE_6542_length_164_cov_1.889764_g6519_i0 | PRJNA513467 | 6542 | 164 | 1.889764 | 3.09921296 | Pseudomonas aeruginosa | 287 | Bacteria | Bacteria | 303 | 3.42e-78 | NTclustered | gi|575870901|emb|HG530068.1| | 1407059 | g6519 | i0 | 100 | 6.95731707317073 | 164 | 0 | 100 | 0 | 1 | 164 | 7126742 | 7126905 | Pseudomonas aeruginosa PA38182, complete genome | blastn | 1141 | 303 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 1761921 | 1761921 | PRJNA513467_S_NODE_6622_length_163_cov_2.714286_g6599_i0 | PRJNA513467 | 6622 | 163 | 2.714286 | 4.42428618 | Stenotrophomonas aracearum | 3003272 | Bacteria | Bacteria | 270 | 3.4499999999999993e-68 | NTclustered | gi|2580481757|gb|CP115543.1| | 3003272 | g6599 | i0 | 96.894 | 1.8159509202454 | 161 | 5 | 99 | 0 | 1 | 161 | 537474 | 537314 | Stenotrophomonas aracearum strain A5588 chromosome | blastn | 296 | 270 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas aracearum | ||
| 1761925 | 1761925 | PRJNA513467_S_NODE_6922_length_161_cov_1.258065_g6899_i0 | PRJNA513467 | 6922 | 161 | 1.258065 | 2.02548465 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 292 | 7.24e-75 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g6899 | i0 | 99.379 | 26.6149068322981 | 161 | 1 | 100 | 0 | 1 | 161 | 3399550 | 3399710 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 4285 | 292 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 2386409 | 2386409 | PRJNA513467_S_NODE_1142_length_313_cov_4.952899_g1119_i0 | PRJNA513467 | 1142 | 313 | 4.952899 | 15.50257387 | root | 1 | Root_unresolved | Root_unresolved | 551 | 2.369999999999999e-152 | NTclustered | gi|2700484197|gb|CP147774.1| | 80878 | g1119 | i0 | 99.023 | 235.916932907348 | 307 | 3 | 98 | 0 | 7 | 313 | 2502413 | 2502719 | Acidovorax temperans strain AA22 chromosome | blastn | 73842 | 556 | 0.991007194244604 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax temperans | ||
| 2386416 | 2386416 | PRJNA513467_S_NODE_4662_length_185_cov_1.864865_g4639_i0 | PRJNA513467 | 4662 | 185 | 1.864865 | 3.45000025 | Escherichia | 561 | Bacteria | Bacteria | 342 | 8.369999999999999e-90 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g4639 | i0 | 100 | 100 | 185 | 0 | 100 | 0 | 1 | 185 | 4292736 | 4292920 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 18500 | 342 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 3037714 | 3037714 | PRJNA513467_S_NODE_2263_length_240_cov_2.689655_g2240_i0 | PRJNA513467 | 2263 | 240 | 2.689655 | 6.455172 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 374 | 4.0599999999999996e-99 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g2240 | i0 | 100 | 83.9583333333333 | 202 | 0 | 84 | 0 | 39 | 240 | 637501 | 637300 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 20150 | 374 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 3037719 | 3037719 | PRJNA513467_S_NODE_2583_length_228_cov_3.136126_g2560_i0 | PRJNA513467 | 2583 | 228 | 3.136126 | 7.15036728 | Acinetobacter junii | 40215 | Bacteria | Bacteria | 422 | 1.34e-113 | NTclustered | gi|2070261312|gb|CP078018.1| | 40215 | g2560 | i0 | 100 | 12.8552631578947 | 228 | 0 | 100 | 0 | 1 | 228 | 437842 | 437615 | Acinetobacter junii strain AJ_351 chromosome, complete genome | blastn | 2931 | 422 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter junii | ||
| 3037723 | 3037723 | PRJNA513467_S_NODE_2863_length_220_cov_2.475410_g2840_i0 | PRJNA513467 | 2863 | 220 | 2.47541 | 5.445902 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 401 | 1.6799999999999993e-107 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g2840 | i0 | 99.545 | 53.7363636363636 | 220 | 1 | 100 | 0 | 1 | 220 | 1741386 | 1741605 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 11822 | 401 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 3037737 | 3037737 | PRJNA513467_S_NODE_4303_length_191_cov_1.006494_g4280_i0 | PRJNA513467 | 4303 | 191 | 1.006494 | 1.92240354 | Lichenibacterium | 2714751 | Bacteria | Bacteria | 119 | 8.909999999999998e-32 | NR | WP_245501222.1 | 2316528 | g4280 | i0 | 87.3 | 1.97905759162304 | 63 | 8 | 99 | 0 | 2 | 190 | 114 | 176 | WP_245501222.1 DsbE family thiol:disulfide interchange protein [Lichenibacterium minor] | diamond | 378 | 120 | 0.991666666666667 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Lichenihabitantaceae | Lichenibacterium | Lichenibacterium minor | ||
| 3662149 | 3662149 | PRJNA513467_S_NODE_1363_length_293_cov_1.371094_g1340_i0 | PRJNA513467 | 1363 | 293 | 1.371094 | 4.01730542 | root | 1 | Root_unresolved | Root_unresolved | 542 | 1.32e-149 | NTclustered | gi|1881029594|gb|CP057051.1| | 562 | g1340 | i0 | 100 | 100 | 293 | 0 | 100 | 0 | 1 | 293 | 74066 | 74358 | Escherichia coli strain RHB39-C20 plasmid pRHB39-C20_2, complete sequence | blastn | 29300 | 542 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 3662159 | 3662159 | PRJNA513467_S_NODE_2563_length_229_cov_2.473958_g2540_i0 | PRJNA513467 | 2563 | 229 | 2.473958 | 5.66536382 | Escherichia | 561 | Bacteria | Bacteria | 424 | 3.76e-114 | NTclustered | gi|2023981091|gb|CP072662.1| | 562 | g2540 | i0 | 100 | 100 | 229 | 0 | 100 | 0 | 1 | 229 | 4470337 | 4470109 | Escherichia coli strain BW25113 frmA KO chromosome | blastn | 22900 | 424 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 3662160 | 3662160 | PRJNA513467_S_NODE_4043_length_195_cov_1.462025_g4020_i0 | PRJNA513467 | 4043 | 195 | 1.462025 | 2.85094875 | Escherichia | 561 | Bacteria | Bacteria | 361 | 2.46e-95 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g4020 | i0 | 100 | 100 | 195 | 0 | 100 | 0 | 1 | 195 | 657640 | 657834 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 19500 | 361 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 3662163 | 3662163 | PRJNA513467_S_NODE_5523_length_174_cov_2.350365_g5500_i0 | PRJNA513467 | 5523 | 174 | 2.350365 | 4.0896351 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 322 | 1.01e-83 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g5500 | i0 | 100 | 100 | 174 | 0 | 100 | 0 | 1 | 174 | 2606746 | 2606573 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 17400 | 322 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 4313581 | 4313581 | PRJNA513467_S_NODE_1844_length_260_cov_2.219731_g1821_i0 | PRJNA513467 | 1844 | 260 | 2.219731 | 5.7713006 | Acinetobacter pittii | 48296 | Bacteria | Bacteria | 481 | 2.55e-131 | NTclustered | gi|1725273704|gb|CP028574.2| | 48296 | g1821 | i0 | 100 | 93.6884615384615 | 260 | 0 | 100 | 0 | 1 | 260 | 1285952 | 1286211 | Acinetobacter pittii strain WCHAP005046 chromosome, complete genome | blastn | 24359 | 481 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter pittii | ||
| 4313583 | 4313583 | PRJNA513467_S_NODE_1984_length_253_cov_8.736111_g1961_i0 | PRJNA513467 | 1984 | 253 | 8.736111 | 22.10236083 | Massilia litorea | 2769491 | Bacteria | Bacteria | 435 | 1.95e-117 | NTclustered | gi|1917238871|gb|CP062941.1| | 2769491 | g1961 | i0 | 97.638 | 471.537549407115 | 254 | 4 | 100 | 2 | 1 | 253 | 561759 | 561507 | Massilia litorea strain LPB0304 chromosome, complete genome | blastn | 119299 | 435 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia litorea | ||
| 4313619 | 4313619 | PRJNA513467_S_NODE_5184_length_178_cov_2.489362_g5161_i0 | PRJNA513467 | 5184 | 178 | 2.489362 | 4.43106436 | Acidovorax temperans | 80878 | Bacteria | Bacteria | 322 | 1.04e-83 | NTclustered | gi|2700484197|gb|CP147774.1| | 80878 | g5161 | i0 | 100 | 6.34269662921348 | 174 | 0 | 98 | 0 | 5 | 178 | 888913 | 889086 | Acidovorax temperans strain AA22 chromosome | blastn | 1129 | 322 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax temperans | ||
| 4939162 | 4939162 | PRJNA513467_S_NODE_7664_length_155_cov_1.652542_g7641_i0 | PRJNA513467 | 7664 | 155 | 1.652542 | 2.5614401 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 287 | 3.21e-73 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g7641 | i0 | 100 | 100 | 155 | 0 | 100 | 0 | 1 | 155 | 1811560 | 1811714 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 15500 | 287 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 5590471 | 5590471 | PRJNA513467_S_NODE_1965_length_254_cov_2.778802_g1942_i0 | PRJNA513467 | 1965 | 254 | 2.778802 | 7.05815708 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 464 | 2.4999999999999994e-126 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g1942 | i0 | 99.606 | 99.8937007874016 | 254 | 1 | 100 | 0 | 1 | 254 | 1458164 | 1457911 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 25373 | 464 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 5590479 | 5590479 | PRJNA513467_S_NODE_2345_length_237_cov_1.750000_g2322_i0 | PRJNA513467 | 2345 | 237 | 1.75 | 4.1475 | Acinetobacter johnsonii | 40214 | Bacteria | Bacteria | 368 | 1.86e-97 | NTclustered | gi|1958425625|gb|CP068206.1| | 40214 | g2322 | i0 | 100 | 24.3502109704641 | 199 | 0 | 84 | 0 | 39 | 237 | 714547 | 714745 | Acinetobacter johnsonii strain FDAARGOS_1092 chromosome, complete genome | blastn | 5771 | 368 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 5590495 | 5590495 | PRJNA513467_S_NODE_3845_length_198_cov_3.055901_g3822_i0 | PRJNA513467 | 3845 | 198 | 3.055901 | 6.05068398 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 285 | 1.55e-72 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g3822 | i0 | 100 | 76.9494949494949 | 154 | 0 | 78 | 0 | 45 | 198 | 5586101 | 5585948 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 15236 | 285 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 5590508 | 5590508 | PRJNA513467_S_NODE_5265_length_177_cov_3.042857_g5242_i0 | PRJNA513467 | 5265 | 177 | 3.042857 | 5.38585689 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 327 | 2.2199999999999996e-85 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g5242 | i0 | 100 | 82.2824858757062 | 177 | 0 | 100 | 0 | 1 | 177 | 696385 | 696209 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 14564 | 327 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 6214371 | 6214371 | PRJNA513467_S_NODE_2185_length_243_cov_2.572816_g2162_i0 | PRJNA513467 | 2185 | 243 | 2.572816 | 6.25194288 | Acinetobacter | 469 | Bacteria | Bacteria | 416 | 6.739999999999998e-112 | NTclustered | gi|2456158263|gb|CP119200.1| | 40214 | g2162 | i0 | 97.531 | 28.4279835390947 | 243 | 6 | 100 | 0 | 1 | 243 | 2807627 | 2807869 | Acinetobacter johnsonii strain AJ572 chromosome, complete genome | blastn | 6908 | 416 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 6214373 | 6214373 | PRJNA513467_S_NODE_305_length_527_cov_20.634694_g282_i0 | PRJNA513467 | 305 | 527 | 20.634694 | 108.74483738 | Escherichia | 561 | Bacteria | Bacteria | 957 | 0 | NTclustered | gi|2023981091|gb|CP072662.1| | 562 | g282 | i0 | 99.431 | 658.979127134725 | 527 | 3 | 100 | 0 | 1 | 527 | 2721521 | 2720995 | Escherichia coli strain BW25113 frmA KO chromosome | blastn | 347282 | 957 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 6214380 | 6214380 | PRJNA513467_S_NODE_5165_length_179_cov_0.943662_g5142_i0 | PRJNA513467 | 5165 | 179 | 0.943662 | 1.68915498 | Acinetobacter | 469 | Bacteria | Bacteria | 274 | 2.97e-69 | NTclustered | gi|2124231295|gb|CP085284.1| | 29430 | g5142 | i0 | 98.701 | 485.039106145251 | 154 | 2 | 89 | 0 | 1 | 154 | 1645877 | 1646030 | Acinetobacter haemolyticus strain w12 chromosome, complete genome | blastn | 86822 | 276 | 0.992753623188406 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter haemolyticus | ||
| 6214383 | 6214383 | PRJNA513467_S_NODE_625_length_399_cov_3.011050_g602_i0 | PRJNA513467 | 625 | 399 | 3.01105 | 12.0140895 | Escherichia | 561 | Bacteria | Bacteria | 695 | 0 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g602 | i0 | 99.736 | 94.9874686716792 | 379 | 1 | 95 | 0 | 1 | 379 | 4520478 | 4520100 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 37900 | 695 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 6214387 | 6214387 | PRJNA513467_S_NODE_8445_length_150_cov_1.380531_g8422_i0 | PRJNA513467 | 8445 | 150 | 1.380531 | 2.0707965 | Escherichia | 561 | Bacteria | Bacteria | 272 | 8.609999999999998e-69 | NTclustered | gi|2023981091|gb|CP072662.1| | 562 | g8422 | i0 | 99.333 | 142.98 | 150 | 1 | 100 | 0 | 1 | 150 | 2465737 | 2465588 | Escherichia coli strain BW25113 frmA KO chromosome | blastn | 21447 | 272 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 6864404 | 6864404 | PRJNA513467_S_NODE_1966_length_254_cov_2.497696_g1943_i0 | PRJNA513467 | 1966 | 254 | 2.497696 | 6.34414784 | Moraxella sp. K02 | 3149046 | Bacteria | Bacteria | 457 | 4.18e-124 | NTclustered | gi|2740866591|dbj|AP031590.1| | 3149046 | g1943 | i0 | 99.209 | 337.61811023622 | 253 | 2 | 99 | 0 | 2 | 254 | 28959 | 28707 | Moraxella sp. K02 DNA, complete genome | blastn | 85755 | 457 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Moraxella | Moraxella sp. K02 | ||
| 6864435 | 6864435 | PRJNA513467_S_NODE_3906_length_197_cov_2.568750_g3883_i0 | PRJNA513467 | 3906 | 197 | 2.56875 | 5.0604375 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 359 | 8.98e-95 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g3883 | i0 | 99.492 | 74.4467005076142 | 197 | 1 | 100 | 0 | 1 | 197 | 5170194 | 5169998 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 14666 | 359 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 6864442 | 6864442 | PRJNA513467_S_NODE_4726_length_184_cov_2.387755_g4703_i0 | PRJNA513467 | 4726 | 184 | 2.387755 | 4.3934692 | Sphingomonas sp. QA11 | 2950605 | Bacteria | Bacteria | 204 | 4.09e-48 | NTclustered | gi|2440470644|gb|CP098774.1| | 2950605 | g4703 | i0 | 87.222 | 20.5326086956522 | 180 | 22 | 98 | 1 | 4 | 183 | 1832150 | 1831972 | Sphingomonas sp. QA11 chromosome, complete genome | blastn | 3778 | 204 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. QA11 | ||
| 6864453 | 6864453 | PRJNA513467_S_NODE_5706_length_172_cov_2.592593_g5683_i0 | PRJNA513467 | 5706 | 172 | 2.592593 | 4.45925996 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 318 | 1.2899999999999999e-82 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g5683 | i0 | 100 | 49.5813953488372 | 172 | 0 | 100 | 0 | 1 | 172 | 3111991 | 3112162 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 8528 | 318 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 6864458 | 6864458 | PRJNA513467_S_NODE_6126_length_168_cov_1.488550_g6103_i0 | PRJNA513467 | 6126 | 168 | 1.48855 | 2.500764 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 303 | 3.53e-78 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g6103 | i0 | 99.401 | 99.4047619047619 | 167 | 1 | 99 | 0 | 1 | 167 | 5543926 | 5543760 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 16700 | 303 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 6864464 | 6864464 | PRJNA513467_S_NODE_6526_length_164_cov_2.251969_g6503_i0 | PRJNA513467 | 6526 | 164 | 2.251969 | 3.69322916 | Faucicola osloensis | 34062 | Bacteria | Bacteria | 292 | 7.41e-75 | NTclustered | gi|1958308771|gb|CP068109.1| | 34062 | g6503 | i0 | 98.78 | 15.9573170731707 | 164 | 2 | 100 | 0 | 1 | 164 | 1445233 | 1445070 | Moraxella osloensis strain FDAARGOS_1130 chromosome, complete genome | blastn | 2617 | 292 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 6864475 | 6864475 | PRJNA513467_S_NODE_7086_length_159_cov_2.557377_g7063_i0 | PRJNA513467 | 7086 | 159 | 2.557377 | 4.06622943 | Acinetobacter johnsonii | 40214 | Bacteria | Bacteria | 294 | 1.98e-75 | NTclustered | gi|1943168292|gb|CP065666.1| | 40214 | g7063 | i0 | 100 | 29.5094339622642 | 159 | 0 | 100 | 0 | 1 | 159 | 3229402 | 3229560 | Acinetobacter johnsonii strain FDAARGOS_910 chromosome, complete genome | blastn | 4692 | 294 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 7488970 | 7488970 | PRJNA513467_S_NODE_1006_length_331_cov_43.214286_g983_i0 | PRJNA513467 | 1006 | 331 | 43.214286 | 143.03928666 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 604 | 1.9099999999999992e-168 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g983 | i0 | 100 | 98.7915407854985 | 327 | 0 | 99 | 0 | 3 | 329 | 1033766 | 1033440 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 32700 | 604 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 7488971 | 7488971 | PRJNA513467_S_NODE_1106_length_317_cov_9.839286_g1083_i0 | PRJNA513467 | 1106 | 317 | 9.839286 | 31.19053662 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 586 | 6.579999999999998e-163 | NTclustered | gi|2121307080|dbj|LC654881.1| | 550 | g1083 | i0 | 100 | 212.880126182965 | 317 | 0 | 100 | 0 | 1 | 317 | 331 | 15 | Enterobacter cloacae JCM 20208 gene for 16S rRNA, partial sequence | blastn | 67483 | 586 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacter | Enterobacter cloacae | ||
| 7488974 | 7488974 | PRJNA513467_S_NODE_3006_length_216_cov_159.804469_g2983_i0 | PRJNA513467 | 3006 | 216 | 159.804469 | 345.17765304 | Enterobacterales | 91347 | Bacteria | Bacteria | 331 | 2.19e-86 | NTclustered | gi|1430334763|gb|CP030238.1| | 28901 | g2983 | i0 | 100 | 515.097222222222 | 179 | 0 | 83 | 0 | 1 | 179 | 4294976 | 4294798 | Salmonella enterica strain SA20055162 chromosome, complete genome | blastn | 111261 | 331 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella enterica | ||
| 7488975 | 7488975 | PRJNA513467_S_NODE_306_length_526_cov_15.709611_g283_i0 | PRJNA513467 | 306 | 526 | 15.709611 | 82.63255386 | Salmonella | 590 | Bacteria | Bacteria | 811 | 0 | NTclustered | gi|2034804371|gb|CP074259.1| | 58712 | g283 | i0 | 94.528 | 698.317490494297 | 530 | 22 | 100 | 6 | 1 | 526 | 4371035 | 4371561 | Salmonella enterica subsp. enterica serovar Anatum strain CFSAN024763 chromosome, complete genome | blastn | 367315 | 811 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella enterica | ||
| 7488979 | 7488979 | PRJNA513467_S_NODE_3926_length_197_cov_1.768750_g3903_i0 | PRJNA513467 | 3926 | 197 | 1.76875 | 3.4844375 | Moraxellaceae | 468 | Bacteria | Bacteria | 364 | 1.929999999999999e-96 | NTclustered | gi|2593446548|gb|OR699078.1| | 479 | g3903 | i0 | 100 | 291.345177664975 | 197 | 0 | 100 | 0 | 1 | 197 | 650 | 846 | Moraxella sp. strain Hz 62-2 23S ribosomal RNA gene, partial sequence | blastn | 57395 | 364 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Moraxella | Moraxella sp. | ||
| 7488980 | 7488980 | PRJNA513467_S_NODE_3966_length_196_cov_2.660377_g3943_i0 | PRJNA513467 | 3966 | 196 | 2.660377 | 5.21433892 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 363 | 6.899999999999998e-96 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g3943 | i0 | 100 | 101 | 196 | 0 | 100 | 0 | 1 | 196 | 979781 | 979976 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 19796 | 363 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 7488985 | 7488985 | PRJNA513467_S_NODE_5506_length_175_cov_1.130435_g5483_i0 | PRJNA513467 | 5506 | 175 | 1.130435 | 1.97826125 | Pseudomonas | 286 | Bacteria | Bacteria | 324 | 2.83e-84 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g5483 | i0 | 100 | 99.9771428571429 | 175 | 0 | 100 | 0 | 1 | 175 | 1242910 | 1243084 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 17496 | 324 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 7488988 | 7488988 | PRJNA513467_S_NODE_5966_length_170_cov_1.090226_g5943_i0 | PRJNA513467 | 5966 | 170 | 1.090226 | 1.8533842 | Acinetobacter | 469 | Bacteria | Bacteria | 315 | 1.64e-81 | NTclustered | gi|1432940805|gb|CP031011.1| | 40214 | g5943 | i0 | 100 | 26 | 170 | 0 | 100 | 0 | 1 | 170 | 2142645 | 2142476 | Acinetobacter johnsonii strain LXL_C1 chromosome, complete genome | blastn | 4420 | 315 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 7488989 | 7488989 | PRJNA513467_S_NODE_6606_length_164_cov_0.921260_g6583_i0 | PRJNA513467 | 6606 | 164 | 0.92126 | 1.5108664 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 303 | 3.42e-78 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g6583 | i0 | 100 | 101 | 164 | 0 | 100 | 0 | 1 | 164 | 3689862 | 3690025 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 16564 | 303 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 8139733 | 8139733 | PRJNA513467_S_NODE_2567_length_229_cov_2.031250_g2544_i0 | PRJNA513467 | 2567 | 229 | 2.03125 | 4.6515625 | Vogesella sp. XCS3 | 2877939 | Bacteria | Bacteria | 390 | 3.81e-104 | NTclustered | gi|2124242701|gb|CP085530.1| | 2877939 | g2544 | i0 | 97.38 | 84.9781659388646 | 229 | 6 | 100 | 0 | 1 | 229 | 3336707 | 3336479 | Vogesella sp. XCS3 chromosome, complete genome | blastn | 19460 | 390 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chromobacteriaceae | Vogesella | Vogesella sp. XCS3 | ||
| 8139753 | 8139753 | PRJNA513467_S_NODE_4847_length_183_cov_1.335616_g4824_i0 | PRJNA513467 | 4847 | 183 | 1.335616 | 2.44417728 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 289 | 1.0899999999999998e-73 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g4824 | i0 | 95.082 | 4 | 183 | 9 | 100 | 0 | 1 | 183 | 1815030 | 1815212 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 732 | 289 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 8139756 | 8139756 | PRJNA513467_S_NODE_5087_length_180_cov_1.090909_g5064_i0 | PRJNA513467 | 5087 | 180 | 1.090909 | 1.9636362 | Xanthomonas theicola | 56464 | Bacteria | Bacteria | 289 | 1.07e-73 | NTclustered | gi|1893325938|gb|CP049017.1| | 56464 | g5064 | i0 | 95.58 | 172.955555555556 | 181 | 7 | 100 | 1 | 1 | 180 | 39466 | 39286 | Xanthomonas theicola strain CFBP 4691 chromosome, complete genome | blastn | 31132 | 289 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Xanthomonas | Xanthomonas theicola | ||
| 8139780 | 8139780 | PRJNA513467_S_NODE_707_length_382_cov_3.026087_g684_i0 | PRJNA513467 | 707 | 382 | 3.026087 | 11.55965234 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 684 | 0 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g684 | i0 | 100 | 96.9083769633508 | 370 | 0 | 97 | 0 | 1 | 370 | 1491281 | 1491650 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 37019 | 684 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 8763882 | 8763882 | PRJNA513467_S_NODE_1387_length_290_cov_9.324111_g1364_i0 | PRJNA513467 | 1387 | 290 | 9.324111 | 27.0399219 | Pseudomonas | 286 | Bacteria | Bacteria | 536 | 6.079999999999999e-148 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g1364 | i0 | 100 | 110 | 290 | 0 | 100 | 0 | 1 | 290 | 6751 | 7040 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 31900 | 536 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 8763883 | 8763883 | PRJNA513467_S_NODE_1407_length_289_cov_2.210317_g1384_i0 | PRJNA513467 | 1407 | 289 | 2.210317 | 6.38781613 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 534 | 2.18e-147 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g1384 | i0 | 100 | 100 | 289 | 0 | 100 | 0 | 1 | 289 | 364631 | 364919 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 28900 | 534 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 8763889 | 8763889 | PRJNA513467_S_NODE_2847_length_221_cov_1.005435_g2824_i0 | PRJNA513467 | 2847 | 221 | 1.005435 | 2.22201135 | Acinetobacter | 469 | Bacteria | Bacteria | 403 | 4.69e-108 | NTclustered | gi|1798085427|gb|CP032002.1| | 29430 | g2824 | i0 | 99.548 | 380.719457013575 | 221 | 1 | 100 | 0 | 1 | 221 | 885540 | 885760 | Acinetobacter haemolyticus strain 11616 chromosome, complete genome | blastn | 84139 | 403 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter haemolyticus | ||
| 9414863 | 9414863 | PRJNA513467_S_NODE_7288_length_158_cov_1.289256_g7265_i0 | PRJNA513467 | 7288 | 158 | 1.289256 | 2.03702448 | Escherichia coli | 562 | Bacteria | Bacteria | 292 | 7.07e-75 | NTclustered | gi|1539602269|emb|LR134227.1| | 562 | g7265 | i0 | 100 | 100 | 158 | 0 | 100 | 0 | 1 | 158 | 2120891 | 2120734 | Escherichia coli strain NCTC9102 genome assembly, chromosome: 1 | blastn | 15800 | 292 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 10039424 | 10039424 | PRJNA513467_S_NODE_1368_length_292_cov_2.105882_g1345_i0 | PRJNA513467 | 1368 | 292 | 2.105882 | 6.14917544 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 516 | 7.979999999999999e-142 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g1345 | i0 | 100 | 95.5479452054795 | 279 | 0 | 96 | 0 | 14 | 292 | 727156 | 727434 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 27900 | 516 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 10039430 | 10039430 | PRJNA513467_S_NODE_288_length_541_cov_4.099206_g265_i0 | PRJNA513467 | 288 | 541 | 4.099206 | 22.17670446 | Escherichia | 561 | Bacteria | Bacteria | 989 | 0 | NTclustered | gi|2023981091|gb|CP072662.1| | 562 | g265 | i0 | 99.631 | 100.182994454713 | 542 | 1 | 100 | 1 | 1 | 541 | 3490631 | 3491172 | Escherichia coli strain BW25113 frmA KO chromosome | blastn | 54199 | 989 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 10039433 | 10039433 | PRJNA513467_S_NODE_3508_length_205_cov_1.571429_g3485_i0 | PRJNA513467 | 3508 | 205 | 1.571429 | 3.22142945 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 379 | 7.229999999999999e-101 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g3485 | i0 | 100 | 101 | 205 | 0 | 100 | 0 | 1 | 205 | 3356608 | 3356812 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 20705 | 379 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 10039447 | 10039447 | PRJNA513467_S_NODE_7308_length_158_cov_0.966942_g7285_i0 | PRJNA513467 | 7308 | 158 | 0.966942 | 1.52776836 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 292 | 7.07e-75 | NTclustered | gi|2484673285|gb|CP099271.1| | 562 | g7285 | i0 | 100 | 99.5 | 158 | 0 | 100 | 0 | 1 | 158 | 23753 | 23596 | Escherichia coli strain RHB07-SO-C04 plasmid unnamed1, complete sequence | blastn | 15721 | 292 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 10690430 | 10690430 | PRJNA513467_S_NODE_1689_length_269_cov_3.383621_g1666_i0 | PRJNA513467 | 1689 | 269 | 3.383621 | 9.10194049 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 497 | 2.63e-136 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g1666 | i0 | 100 | 100.31970260223 | 269 | 0 | 100 | 0 | 1 | 269 | 4972837 | 4972569 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 26986 | 497 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 10690491 | 10690491 | PRJNA513467_S_NODE_7209_length_158_cov_2.578512_g7186_i0 | PRJNA513467 | 7209 | 158 | 2.578512 | 4.07404896 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 215 | 1.57e-51 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g7186 | i0 | 100 | 72.3101265822785 | 116 | 0 | 73 | 0 | 43 | 158 | 5055198 | 5055083 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 11425 | 215 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 11314066 | 11314066 | PRJNA513467_S_NODE_1809_length_262_cov_2.080000_g1786_i0 | PRJNA513467 | 1809 | 262 | 2.08 | 5.4496 | Pseudomonas | 286 | Bacteria | Bacteria | 180 | 1.0499999999999999e-40 | NTclustered | gi|2643672927|gb|CP133209.1| | 294 | g1786 | i0 | 100 | 37.0229007633588 | 97 | 0 | 37 | 0 | 166 | 262 | 1980234 | 1980138 | Pseudomonas fluorescens strain CFBP2392 chromosome, complete genome | blastn | 9700 | 180 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 11314067 | 11314067 | PRJNA513467_S_NODE_1989_length_253_cov_3.527778_g1966_i0 | PRJNA513467 | 1989 | 253 | 3.527778 | 8.92527834 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 468 | 1.92e-127 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g1966 | i0 | 100 | 100 | 253 | 0 | 100 | 0 | 1 | 253 | 3897234 | 3897486 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 25300 | 468 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 11314075 | 11314075 | PRJNA513467_S_NODE_3829_length_199_cov_1.209877_g3806_i0 | PRJNA513467 | 3829 | 199 | 1.209877 | 2.40765523 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 363 | 7.019999999999998e-96 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g3806 | i0 | 99.497 | 101 | 199 | 1 | 100 | 0 | 1 | 199 | 3691587 | 3691389 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 20099 | 363 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 11965438 | 11965438 | PRJNA513467_S_NODE_430_length_471_cov_2.914747_g407_i0 | PRJNA513467 | 430 | 471 | 2.914747 | 13.72845837 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 649 | 0 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g407 | i0 | 99.718 | 75.1125265392781 | 354 | 1 | 75 | 0 | 1 | 354 | 1769642 | 1769995 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 35378 | 649 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 11965454 | 11965454 | PRJNA513467_S_NODE_610_length_401_cov_6.274725_g587_i0 | PRJNA513467 | 610 | 401 | 6.274725 | 25.16164725 | Massilia litorea | 2769491 | Bacteria | Bacteria | 617 | 3.02e-172 | NTclustered | gi|1917238871|gb|CP062941.1| | 2769491 | g587 | i0 | 94.541 | 463.800498753117 | 403 | 16 | 100 | 6 | 1 | 401 | 1006875 | 1007273 | Massilia litorea strain LPB0304 chromosome, complete genome | blastn | 185984 | 617 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia litorea | ||
| 11965472 | 11965472 | PRJNA513467_S_NODE_7970_length_153_cov_1.370690_g7947_i0 | PRJNA513467 | 7970 | 153 | 1.37069 | 2.0971557 | Faucicola osloensis | 34062 | Bacteria | Bacteria | 259 | 6.88e-65 | NTclustered | gi|1985959268|gb|CP069437.1| | 34062 | g7947 | i0 | 100 | 321.254901960784 | 140 | 0 | 94 | 0 | 14 | 153 | 709527 | 709666 | Moraxella osloensis strain FDAARGOS_1202 chromosome, complete genome | blastn | 49152 | 259 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 11965475 | 11965475 | PRJNA513467_S_NODE_8230_length_151_cov_2.500000_g8207_i0 | PRJNA513467 | 8230 | 151 | 2.5 | 3.775 | Sphingomonas echinoides | 59803 | Bacteria | Bacteria | 98.6 | 2.17e-22 | NR | WP_010406877.1 | 59803 | g8207 | i0 | 100 | 0.933774834437086 | 47 | 0 | 93.4 | 0 | 3 | 143 | 440 | 486 | WP_010406877.1 Y-family DNA polymerase [Sphingomonas echinoides] | diamond | 141 | 98.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas echinoides | ||
| 12589837 | 12589837 | PRJNA513467_S_NODE_2450_length_233_cov_1.811224_g2427_i0 | PRJNA513467 | 2450 | 233 | 1.811224 | 4.22015192 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 425 | 1.07e-114 | NTclustered | gi|2211724983|gb|CP066839.1| | 562 | g2427 | i0 | 99.571 | 100 | 233 | 1 | 100 | 0 | 1 | 233 | 1815237 | 1815469 | Escherichia coli strain Ec-RL2-1X chromosome, complete genome | blastn | 23300 | 425 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 12589838 | 12589838 | PRJNA513467_S_NODE_350_length_504_cov_2.443255_g327_i0 | PRJNA513467 | 350 | 504 | 2.443255 | 12.3140052 | Pseudomonas | 286 | Bacteria | Bacteria | 926 | 0 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g327 | i0 | 99.802 | 100 | 504 | 1 | 100 | 0 | 1 | 504 | 5808818 | 5809321 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 50400 | 926 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 12589846 | 12589846 | PRJNA513467_S_NODE_6990_length_160_cov_1.731707_g6967_i0 | PRJNA513467 | 6990 | 160 | 1.731707 | 2.7707312 | Pseudomonadota | 1224 | Bacteria | Bacteria | 296 | 5.55e-76 | NTclustered | gi|2103567975|gb|OK326642.1| | 479 | g6967 | i0 | 100 | 106 | 160 | 0 | 100 | 0 | 1 | 160 | 239 | 80 | Moraxella sp. strain Y2-U-1 16S ribosomal RNA gene, partial sequence | blastn | 16960 | 296 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Moraxella | Moraxella sp. | ||
| 12589848 | 12589848 | PRJNA513467_S_NODE_7810_length_154_cov_1.666667_g7787_i0 | PRJNA513467 | 7810 | 154 | 1.666667 | 2.56666718 | Escherichia | 561 | Bacteria | Bacteria | 285 | 1.14e-72 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g7787 | i0 | 100 | 100 | 154 | 0 | 100 | 0 | 1 | 154 | 2775359 | 2775512 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 15400 | 285 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 13240625 | 13240625 | PRJNA513467_S_NODE_7571_length_156_cov_1.310924_g7548_i0 | PRJNA513467 | 7571 | 156 | 1.310924 | 2.04504144 | Burkholderia sp. IDO3 | 1705310 | Bacteria | Bacteria | 289 | 9e-74 | NTclustered | gi|1443111164|gb|CP028965.1| | 1705310 | g7548 | i0 | 100 | 104 | 156 | 0 | 100 | 0 | 1 | 156 | 332065 | 331910 | Burkholderia sp. IDO3 plasmid p1, complete sequence | blastn | 16224 | 289 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia sp. IDO3 | ||
| 13864676 | 13864676 | PRJNA513467_S_NODE_3671_length_201_cov_2.792683_g3648_i0 | PRJNA513467 | 3671 | 201 | 2.792683 | 5.61329283 | Moraxellaceae | 468 | Bacteria | Bacteria | 327 | 2.59e-85 | NTclustered | gi|1278990996|gb|CP024443.2| | 34062 | g3648 | i0 | 96.02 | 13.18407960199 | 201 | 8 | 100 | 0 | 1 | 201 | 579008 | 578808 | Moraxella osloensis strain NP7 chromosome, complete genome | blastn | 2650 | 327 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 13864684 | 13864684 | PRJNA513467_S_NODE_6311_length_166_cov_2.503876_g6288_i0 | PRJNA513467 | 6311 | 166 | 2.503876 | 4.15643416 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|2023981091|gb|CP072662.1| | 562 | g6288 | i0 | 100 | 100 | 166 | 0 | 100 | 0 | 1 | 166 | 1483566 | 1483731 | Escherichia coli strain BW25113 frmA KO chromosome | blastn | 16600 | 307 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 13864686 | 13864686 | PRJNA513467_S_NODE_7791_length_154_cov_2.000000_g7768_i0 | PRJNA513467 | 7791 | 154 | 2 | 3.08 | Escherichia | 561 | Bacteria | Bacteria | 285 | 1.14e-72 | NTclustered | gi|2841922414|gb|CP163901.1| | 562 | g7768 | i0 | 100 | 104 | 154 | 0 | 100 | 0 | 1 | 154 | 1875171 | 1875018 | Escherichia coli strain OXEC-129 chromosome, complete genome | blastn | 16016 | 285 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 14515631 | 14515631 | PRJNA513467_S_NODE_512_length_431_cov_2.043147_g489_i0 | PRJNA513467 | 512 | 431 | 2.043147 | 8.80596357 | Faucicola osloensis | 34062 | Bacteria | Bacteria | 702 | 0 | NTclustered | gi|2722728872|dbj|AP031472.1| | 34062 | g489 | i0 | 96.056 | 34.8677494199536 | 431 | 17 | 100 | 0 | 1 | 431 | 1951536 | 1951106 | Moraxella osloensis NBRC 115781 DNA, complete genome | blastn | 15028 | 702 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 14515634 | 14515634 | PRJNA513467_S_NODE_5312_length_177_cov_1.450000_g5289_i0 | PRJNA513467 | 5312 | 177 | 1.45 | 2.5665 | Magnetospirillum sp. ME-1 | 1639348 | Bacteria | Bacteria | 165 | 1.84e-36 | NTclustered | gi|1184805171|gb|CP015848.1| | 1639348 | g5289 | i0 | 84.091 | 14.0112994350282 | 176 | 23 | 99 | 3 | 2 | 175 | 469342 | 469514 | Magnetospirillum sp. ME-1 chromosome, complete genome | blastn | 2480 | 165 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Rhodospirillaceae | Magnetospirillum | Magnetospirillum sp. ME-1 | ||
| 14515660 | 14515660 | PRJNA513467_S_NODE_8452_length_150_cov_1.380531_g8429_i0 | PRJNA513467 | 8452 | 150 | 1.380531 | 2.0707965 | Acidovorax temperans | 80878 | Bacteria | Bacteria | 261 | 1.86e-65 | NTclustered | gi|2442619374|gb|CP117193.1| | 80878 | g8429 | i0 | 98 | 2.36666666666667 | 150 | 3 | 100 | 0 | 1 | 150 | 3611491 | 3611640 | Acidovorax temperans strain LMJ chromosome, complete genome | blastn | 355 | 261 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax temperans | ||
| 15138946 | 15138946 | PRJNA513467_S_NODE_1132_length_314_cov_2.700361_g1109_i0 | PRJNA513467 | 1132 | 314 | 2.700361 | 8.47913354 | root | 1 | Root_unresolved | Root_unresolved | 580 | 3.0299999999999992e-161 | NTclustered | gi|1759042442|gb|CP042846.1| | 562 | g1109 | i0 | 100 | 99.8662420382166 | 314 | 0 | 100 | 0 | 1 | 314 | 1660227 | 1660540 | Escherichia coli strain JME64 chromosome, complete genome | blastn | 31358 | 580 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 15138959 | 15138959 | PRJNA513467_S_NODE_52_length_1079_cov_3.581574_g39_i0 | PRJNA513467 | 52 | 1079 | 3.581574 | 38.64518346 | Escherichia | 561 | Bacteria | Bacteria | 1773 | 0 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g39 | i0 | 100 | 88.9712696941613 | 960 | 0 | 89 | 0 | 1 | 960 | 3849579 | 3850538 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 96000 | 1773 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 15789362 | 15789362 | PRJNA513467_S_NODE_1793_length_263_cov_1.650442_g1770_i0 | PRJNA513467 | 1793 | 263 | 1.650442 | 4.34066246 | Psychrobacter alimentarius | 261164 | Bacteria | Bacteria | 486 | 5.5499999999999986e-133 | NTclustered | gi|2732962131|dbj|AP031495.1| | 261164 | g1770 | i0 | 100 | 3 | 263 | 0 | 100 | 0 | 1 | 263 | 1434757 | 1434495 | Psychrobacter alimentarius Psys_23 DNA, complete genome | blastn | 789 | 486 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Psychrobacter | Psychrobacter alimentarius | ||
| 15789369 | 15789369 | PRJNA513467_S_NODE_2593_length_228_cov_2.324607_g2570_i0 | PRJNA513467 | 2593 | 228 | 2.324607 | 5.30010396 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 211 | 3.17e-50 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g2570 | i0 | 100 | 50.6710526315789 | 114 | 0 | 50 | 0 | 1 | 114 | 1481188 | 1481301 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 11553 | 211 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 15789420 | 15789420 | PRJNA513467_S_NODE_6193_length_167_cov_2.400000_g6170_i0 | PRJNA513467 | 6193 | 167 | 2.4 | 4.008 | unclassified Methylophilus | 2630143 | Bacteria | Bacteria | 103 | 1.51e-25 | NR | WP_019881796.1 | 2630143 | g6170 | i0 | 100 | 0.988023952095808 | 55 | 0 | 98.8 | 0 | 3 | 167 | 131 | 185 | WP_019881796.1 MULTISPECIES: Bax inhibitor-1 family protein [unclassified Methylophilus] | diamond | 165 | 103 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Methylophilaceae | Methylophilus | |||
| 15789423 | 15789423 | PRJNA513467_S_NODE_6633_length_163_cov_2.166667_g6610_i0 | PRJNA513467 | 6633 | 163 | 2.166667 | 3.53166721 | Methylosinus sporium | 428 | Bacteria | Bacteria | 106 | 1.03e-18 | NTclustered | gi|2890204306|dbj|AP038973.1| | 428 | g6610 | i0 | 81.203 | 9.11042944785276 | 133 | 23 | 81 | 2 | 7 | 138 | 1609205 | 1609336 | Methylosinus sporium TuR21-B3a DNA, complete genome | blastn | 1485 | 106 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylocystaceae | Methylosinus | Methylosinus sporium | ||
| 16413565 | 16413565 | PRJNA513467_S_NODE_1353_length_293_cov_3.152344_g1330_i0 | PRJNA513467 | 1353 | 293 | 3.152344 | 9.23636792 | Escherichia | 561 | Bacteria | Bacteria | 542 | 1.32e-149 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g1330 | i0 | 100 | 100 | 293 | 0 | 100 | 0 | 1 | 293 | 3849462 | 3849170 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 29300 | 542 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 16413566 | 16413566 | PRJNA513467_S_NODE_2113_length_247_cov_2.414286_g2090_i0 | PRJNA513467 | 2113 | 247 | 2.414286 | 5.96328642 | Escherichia | 561 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g2090 | i0 | 100 | 100 | 247 | 0 | 100 | 0 | 1 | 247 | 673597 | 673351 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 24700 | 457 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 16413570 | 16413570 | PRJNA513467_S_NODE_3793_length_199_cov_2.796296_g3770_i0 | PRJNA513467 | 3793 | 199 | 2.796296 | 5.56462904 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 368 | 1.51e-97 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g3770 | i0 | 100 | 100 | 199 | 0 | 100 | 0 | 1 | 199 | 3150047 | 3150245 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 19900 | 368 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 18338369 | 18338369 | PRJNA513467_S_NODE_5895_length_170_cov_2.751880_g5872_i0 | PRJNA513467 | 5895 | 170 | 2.75188 | 4.678196 | Undibacterium cyanobacteriorum | 3073561 | Bacteria | Bacteria | 292 | 7.69e-75 | NTclustered | gi|2575695762|gb|CP133720.1| | 3073561 | g5872 | i0 | 97.647 | 421.341176470588 | 170 | 4 | 100 | 0 | 1 | 170 | 740509 | 740340 | Undibacterium cyanobacteriorum strain 20NA77.5 chromosome, complete genome | blastn | 71628 | 292 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium cyanobacteriorum | ||
| 18962522 | 18962522 | PRJNA513467_S_NODE_1015_length_329_cov_41.914384_g992_i0 | PRJNA513467 | 1015 | 329 | 41.914384 | 137.89832336 | Escherichia | 561 | Bacteria | Bacteria | 462 | 1.21e-125 | NTclustered | gi|2579192470|gb|CP134353.1| | 562 | g992 | i0 | 97.761 | 542.145896656535 | 268 | 6 | 81 | 0 | 25 | 292 | 4645934 | 4645667 | Escherichia coli strain TUM17668 chromosome, complete genome | blastn | 178366 | 462 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 18962523 | 18962523 | PRJNA513467_S_NODE_1335_length_294_cov_4.140078_g1312_i0 | PRJNA513467 | 1335 | 294 | 4.140078 | 12.17182932 | Escherichia | 561 | Bacteria | Bacteria | 544 | 3.69e-150 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g1312 | i0 | 100 | 100 | 294 | 0 | 100 | 0 | 1 | 294 | 3689096 | 3689389 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 29400 | 544 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 18962534 | 18962534 | PRJNA513467_S_NODE_5575_length_174_cov_1.394161_g5552_i0 | PRJNA513467 | 5575 | 174 | 1.394161 | 2.42584014 | root | 1 | Root_unresolved | Root_unresolved | 322 | 1.01e-83 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g5552 | i0 | 100 | 100 | 174 | 0 | 100 | 0 | 1 | 174 | 1321870 | 1321697 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 17400 | 322 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 18962536 | 18962536 | PRJNA513467_S_NODE_6095_length_168_cov_2.412214_g6072_i0 | PRJNA513467 | 6095 | 168 | 2.412214 | 4.05251952 | Massilia | 149698 | Bacteria | Bacteria | 298 | 1.64e-76 | NTclustered | gi|2327757735|dbj|AP026966.1| | 457921 | g6072 | i0 | 98.81 | 535.255952380952 | 168 | 1 | 100 | 1 | 1 | 168 | 1053516 | 1053682 | Massilia varians N-3 DNA, complete genome | blastn | 89923 | 298 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia varians | ||
| 18962537 | 18962537 | PRJNA513467_S_NODE_615_length_400_cov_11.804408_g592_i0 | PRJNA513467 | 615 | 400 | 11.804408 | 47.217632 | Massilia | 149698 | Bacteria | Bacteria | 701 | 0 | NTclustered | gi|1888689060|gb|CP050454.1| | 2709302 | g592 | i0 | 98.259 | 550.455 | 402 | 3 | 100 | 4 | 1 | 400 | 811564 | 811165 | Massilia sp. Dwa41.01b chromosome, complete genome | blastn | 220182 | 706 | 0.992917847025496 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia sp. Dwa41.01b | ||
| 18962538 | 18962538 | PRJNA513467_S_NODE_6195_length_167_cov_2.300000_g6172_i0 | PRJNA513467 | 6195 | 167 | 2.3 | 3.841 | Escherichia | 561 | Bacteria | Bacteria | 300 | 4.53e-77 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g6172 | i0 | 100 | 97.0059880239521 | 162 | 0 | 97 | 0 | 6 | 167 | 3875430 | 3875591 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 16200 | 300 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 20237348 | 20237348 | PRJNA513467_S_NODE_616_length_400_cov_4.330579_g593_i0 | PRJNA513467 | 616 | 400 | 4.330579 | 17.322316 | Escherichia | 561 | Bacteria | Bacteria | 728 | 0 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g593 | i0 | 99.5 | 100 | 400 | 2 | 100 | 0 | 1 | 400 | 364155 | 364554 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 40000 | 728 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 20237351 | 20237351 | PRJNA513467_S_NODE_756_length_371_cov_15.886228_g733_i0 | PRJNA513467 | 756 | 371 | 15.886228 | 58.93790588 | Escherichia | 561 | Bacteria | Bacteria | 641 | 1.65e-179 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g733 | i0 | 97.844 | 681.398921832884 | 371 | 8 | 100 | 0 | 1 | 371 | 277080 | 277450 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 252799 | 641 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 20237357 | 20237357 | PRJNA513467_S_NODE_96_length_830_cov_23.673392_g78_i0 | PRJNA513467 | 96 | 830 | 23.673392 | 196.4891536 | Pseudomonas | 286 | Bacteria | Bacteria | 1352 | 0 | NTclustered | gi|1920798037|gb|CP063233.1| | 294 | g78 | i0 | 96.158 | 522.9 | 833 | 23 | 100 | 5 | 1 | 830 | 395027 | 394201 | Pseudomonas fluorescens strain KF1 chromosome, complete genome | blastn | 434007 | 1358 | 0.995581737849779 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 20888742 | 20888742 | PRJNA513467_S_NODE_2077_length_249_cov_2.575472_g2054_i0 | PRJNA513467 | 2077 | 249 | 2.575472 | 6.41292528 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|2130678661|gb|CP081968.1| | 294 | g2054 | i0 | 100 | 99.5903614457831 | 249 | 0 | 100 | 0 | 1 | 249 | 1623699 | 1623947 | Pseudomonas fluorescens strain R6-28-08 chromosome, complete genome | blastn | 24798 | 460 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 21512840 | 21512840 | PRJNA513467_S_NODE_1157_length_311_cov_2.718978_g1134_i0 | PRJNA513467 | 1157 | 311 | 2.718978 | 8.45602158 | Pseudomonas | 286 | Bacteria | Bacteria | 564 | 3.02e-156 | NTclustered | gi|2852952072|gb|CP137078.1| | 2565368 | g1134 | i0 | 99.357 | 99.8971061093248 | 311 | 2 | 100 | 0 | 1 | 311 | 1435398 | 1435088 | Pseudomonas atacamensis strain 200B-1 chromosome | blastn | 31068 | 569 | 0.991212653778559 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas atacamensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;