RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA513467", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA513467 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1761857 1761857 PRJNA513467_S_NODE_2382_length_235_cov_89.878788_g2359_i0 PRJNA513467 2382 235 89.878788 211.2151518 Betacoronavirus pandemicum 3418604 Viruses Viruses 75 4.49e-9   NTclustered gi|2565352131|emb|OY625234.1| 2697049 g2359 i0 94 16.4382978723404 50 2 21 1 185 233 23673 23722 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 3863 75 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
5590504 5590504 PRJNA513467_S_NODE_4725_length_184_cov_2.387755_g4702_i0 PRJNA513467 4725 184 2.387755 4.3934692 Plant associated sequivirus 3 2950831 Viruses Viruses 261 2.39e-65   NTclustered gi|2273760649|gb|OL472184.1| 2950831 g4702 i0 92.391 5.45108695652174 184 13 99 1 2 184 10123 9940 MAG: Plant associated sequivirus 3 isolate PLE20SW, complete genome blastn 1003 261 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Sequivirus Plant associated sequivirus 3
11965421 11965421 PRJNA513467_S_NODE_3150_length_213_cov_1.363636_g3127_i0 PRJNA513467 3150 213 1.363636 2.90454468 Fabavirus alphaviciae 3047701 Viruses Viruses 298 2.18e-76   NTclustered gi|2904963151|gb|PQ789800.1| 50817 g3127 i0 91.981 13.3990610328638 212 17 99 0 1 212 5784 5573 Broad bean wilt virus 1 isolate QLD-5612 segment RNA1 polyprotein gene, complete cds blastn 2854 298 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Fabavirus Fabavirus alphaviciae
18338336 18338336 PRJNA513467_S_NODE_3675_length_201_cov_2.548780_g3652_i0 PRJNA513467 3675 201 2.54878 5.1230478 Crogonang virus 69 3063080 Viruses Viruses 265 2.06e-66   NTclustered gi|2626079622|gb|OR270394.1| 3063080 g3652 i0 95.21 4.59203980099502 167 8 83 0 35 201 3122 2956 MAG: Crogonang virus 69 isolate CGH03 genomic sequence blastn 923 265 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Crogonang virus 69

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;