RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA513467", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 6 ✖

tax_phylum 1

  • Kitrinoviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA513467 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
486658 486658 PRJNA513467_S_NODE_5481_length_175_cov_1.586957_g5458_i0 PRJNA513467 5481 175 1.586957 2.77717475 Norway luteo-like virus 4 2034334 Viruses Viruses 270 3.739999999999999e-68   NTclustered gi|1240393784|gb|MF141071.1| 2034334 g5458 i0 96.341 3.76 164 6 94 0 3 166 2018 1855 Norway luteo-like virus 4 isolate NOR/S5/Kilen/2014 RNA-dependent RNA-polymerase gene, partial cds blastn 658 270 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Norway luteo-like virus 4
3037698 3037698 PRJNA513467_S_NODE_1203_length_306_cov_2.375465_g1180_i0 PRJNA513467 1203 306 2.375465 7.2689229 Norway luteo-like virus 4 2034334 Viruses Viruses 553 6.419999999999998e-153   NTclustered gi|1240393781|gb|MF141070.1| 2034334 g1180 i0 99.669 2.91830065359477 302 1 99 0 5 306 4522 4221 Norway luteo-like virus 4 isolate NOR/B1V/Tofte/2014 RNA-dependent RNA-polymerase and coat protein genes, complete cds blastn 893 553 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Norway luteo-like virus 4
10690438 10690438 PRJNA513467_S_NODE_2809_length_221_cov_2.505435_g2786_i0 PRJNA513467 2809 221 2.505435 5.53701135 Allexivirus ecsallii 3433712 Viruses Viruses 375 1.0199999999999998e-99   NTclustered gi|1722561625|gb|MN059411.1| 150284 g2786 i0 97.285 93.5927601809955 221 6 100 0 1 221 7874 7654 Garlic virus X isolate G40, complete genome blastn 20684 375 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Allexivirus Allexivirus ecsallii
10690474 10690474 PRJNA513467_S_NODE_549_length_421_cov_2.140625_g526_i0 PRJNA513467 549 421 2.140625 9.01203125 Allexivirus ecsallii 3433712 Viruses Viruses 656 0   NTclustered gi|410131120|gb|JQ807994.1| 150284 g526 i0 94.774 89.1615201900238 421 22 100 0 1 421 7948 8368 Garlic virus X isolate SW3, complete genome blastn 37537 656 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Allexivirus Allexivirus ecsallii
11965447 11965447 PRJNA513467_S_NODE_530_length_426_cov_5.053985_g507_i0 PRJNA513467 530 426 5.053985 21.5299761 Erysiphe necator associated deltaflexivirus 4 2743097 Viruses Viruses 754 0   NTclustered gi|2288523299|gb|ON811606.1| 2743097 g507 i0 100 3.13145539906103 408 0 96 0 19 426 7113 6706 MAG: Erysiphe necator associated deltaflexivirus 4 isolate TIGMIC_2, complete genome blastn 1334 754 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae Deltaflexivirus Erysiphe necator associated deltaflexivirus 4
14515608 14515608 PRJNA513467_S_NODE_2852_length_220_cov_5.464481_g2829_i0 PRJNA513467 2852 220 5.464481 12.0218582 Norway luteo-like virus 4 2034334 Viruses Viruses 407 3.61e-109   NTclustered gi|1240393781|gb|MF141070.1| 2034334 g2829 i0 100 1 220 0 100 0 1 220 5759 5540 Norway luteo-like virus 4 isolate NOR/B1V/Tofte/2014 RNA-dependent RNA-polymerase and coat protein genes, complete cds blastn 220 407 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Norway luteo-like virus 4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;