RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA513467", tax_phylum = "Armatimonadota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA513467 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24712802 24712802 PRJNA513467_S_NODE_8100_length_152_cov_1.617391_g8077_i0 PRJNA513467 8100 152 1.617391 2.45843432 Capsulimonas corticalis 2219043 Bacteria Bacteria 141 2.58e-29   NTclustered gi|2240447379|dbj|AP025739.1| 2219043 g8077 i0 88.333 106.907894736842 120 10 78 4 7 125 595559 595443 Capsulimonas corticalis AX-7 DNA, complete genome blastn 16250 141 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas corticalis
26743995 26743995 PRJNA513467_S_NODE_6781_length_162_cov_1.560000_g6758_i0 PRJNA513467 6781 162 1.56 2.5272 Bacteria 2 Bacteria Bacteria 60.8 4.91e-9   NR HWD41529.1 1936159 g6758 i0 54.7 3.88888888888889 53 24 98.1 0 161 3 244 296 HWD41529.1 anti-CBASS Acb1 family protein [Fimbriimonas sp.] diamond 630 60.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;