RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA513467", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA513467 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3037706 3037706 PRJNA513467_S_NODE_1823_length_261_cov_2.258929_g1800_i0 PRJNA513467 1823 261 2.258929 5.89580469 Candidatus Phytoplasma solani 69896 Bacteria Bacteria 444 3.36e-120   NTclustered gi|2797120899|gb|CP103787.1| 69896 g1800 i0 97.318 193.984674329502 261 7 100 0 1 261 382925 383185 Candidatus Phytoplasma solani strain c4 chromosome, complete genome blastn 50630 444 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae Candidatus Phytoplasma Candidatus Phytoplasma solani
31467826 31467826 PRJNA513467_S_NODE_6756_length_162_cov_1.872000_g6733_i0 PRJNA513467 6756 162 1.872 3.03264 Mycoplasmopsis arginini 2094 Bacteria Bacteria 102 6.79e-26   NR WP_282460019.1 2094 g6733 i0 98.1 0.981481481481482 53 1 98.1 0 160 2 32 84 WP_282460019.1 antA/AntB antirepressor family protein, partial [Mycoplasmopsis arginini] diamond 159 102 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mycoplasmopsis Mycoplasmopsis arginini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;