contig_metadata
7 rows where bioproject = "PRJNA513467", tax_clade = "PVC group" and tax_kingdom = "Pseudomonadati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5590529 | 5590529 | PRJNA513467_S_NODE_7425_length_157_cov_1.300000_g7402_i0 | PRJNA513467 | 7425 | 157 | 1.3 | 2.041 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 230 | 5.58e-56 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g7402 | i0 | 95.205 | 110.910828025478 | 146 | 6 | 92 | 1 | 9 | 153 | 7051451 | 7051596 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 17413 | 230 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 14515586 | 14515586 | PRJNA513467_S_NODE_1872_length_259_cov_2.004505_g1849_i0 | PRJNA513467 | 1872 | 259 | 2.004505 | 5.19166795 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 263 | 1e-65 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g1849 | i0 | 88.636 | 170.200772200772 | 220 | 19 | 83 | 6 | 44 | 259 | 7050446 | 7050229 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 44082 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 15138951 | 15138951 | PRJNA513467_S_NODE_2892_length_219_cov_4.060440_g2869_i0 | PRJNA513467 | 2892 | 219 | 4.06044 | 8.8923636 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 122 | 7.7699999999999995e-31 | NR | MCE2925315.1 | 2026777 | g2869 | i0 | 79.2 | 0.986301369863014 | 72 | 15 | 98.6 | 0 | 218 | 3 | 227 | 298 | MCE2925315.1 class II fumarate hydratase [Phycisphaeraceae bacterium] | diamond | 216 | 122 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 18338323 | 18338323 | PRJNA513467_S_NODE_2715_length_224_cov_2.754011_g2692_i0 | PRJNA513467 | 2715 | 224 | 2.754011 | 6.16898464 | uncultured Phycisphaerales bacterium | 904075 | Bacteria | Bacteria | 316 | 6.39e-82 | NTclustered | gi|2874253847|emb|OY969903.1| | 904075 | g2692 | i0 | 92.444 | 79.4151785714286 | 225 | 12 | 99 | 5 | 3 | 224 | 1829857 | 1830079 | MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 | blastn | 17789 | 316 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | uncultured Phycisphaerales bacterium | |||
| 21512839 | 21512839 | PRJNA513467_S_NODE_1077_length_322_cov_2.449123_g1054_i0 | PRJNA513467 | 1077 | 322 | 2.449123 | 7.88617606 | Schlesneria | 656899 | Bacteria | Bacteria | 398 | 3.3699999999999992e-106 | NTclustered | gi|12583970|gb|AF245374.1|AF245374 | 149589 | g1054 | i0 | 89.097 | 132.937888198758 | 321 | 32 | 99 | 3 | 3 | 322 | 754 | 1072 | Planctomycete str. 639 23S ribosomal RNA gene, partial sequence | blastn | 42806 | 401 | 0.992518703241895 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | planctomycete str. 639 | ||
| 27155371 | 27155371 | PRJNA513467_S_NODE_1542_length_279_cov_3.004132_g1519_i0 | PRJNA513467 | 1542 | 279 | 3.004132 | 8.38152828 | Bacteria | 2 | Bacteria | Bacteria | 132 | 1.81e-33 | NR | HSX10464.1 | 2047757 | g1519 | i0 | 75.7 | 2.41935483870968 | 74 | 18 | 79.6 | 0 | 226 | 5 | 823 | 896 | HSX10464.1 excinuclease ABC subunit UvrA [Chlamydiales bacterium] | diamond | 675 | 132 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 29966265 | 29966265 | PRJNA513467_S_NODE_1491_length_283_cov_1.890244_g1468_i0 | PRJNA513467 | 1491 | 283 | 1.890244 | 5.34939052 | Bacteria | 2 | Bacteria | Bacteria | 74.3 | 3.51e-13 | NR | MDB6124125.1 | 2024890 | g1468 | i0 | 52.1 | 7.70671378091873 | 73 | 33 | 77.4 | 2 | 6 | 224 | 298 | 368 | MDB6124125.1 hypothetical protein [Pedosphaera sp.] | diamond | 2181 | 74.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;