RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA513467", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA513467 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4313644 4313644 PRJNA513467_S_NODE_8044_length_152_cov_4.017391_g8021_i0 PRJNA513467 8044 152 4.017391 6.10643432 Lunella sp. SW Pacific B 926003 Mollusca Mollusca 52.8 0.012   NTclustered gi|340051992|emb|FR695615.1| 926003 g8021 i0 100 0.736842105263158 28 0 18 0 93 120 49 76 Lunella sp. SW Pacific B mitochondrial partial 12S rRNA gene, isolate M_LCIN.SAN.2 blastn 112 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Trochida Turbinidae Lunella Lunella sp. SW Pacific B
28482185 28482185 PRJNA513467_S_NODE_146_length_722_cov_2.408759_g126_i0 PRJNA513467 146 722 2.408759 17.39123998 Opisthokonta 33154 Mollusca Mollusca 62 4.36e-7   NR XP_045166474.1 6596 g126 i0 43.9 1.45429362880886 57 32 23.7 0 721 551 176 232 XP_045166474.1 UBX domain-containing protein 6-like [Mercenaria mercenaria] diamond 1050 62.4 0.993589743589744 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;