RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA513467", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA513467 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27235179 27235179 PRJNA513467_S_NODE_1763_length_265_cov_1.539474_g1740_i0 PRJNA513467 1763 265 1.539474 4.0796061 Minisyncoccota bacterium 2053589 Bacteria Bacteria 150 1.13e-42   NR MEX0598106.1 2053589 g1740 i0 76.8 1.07547169811321 95 15 99.6 1 265 2 44 138 MEX0598106.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 285 150 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27425055 27425055 PRJNA513467_S_NODE_5303_length_177_cov_1.671429_g5280_i0 PRJNA513467 5303 177 1.671429 2.95842933 Minisyncoccota bacterium 2053589 Bacteria Bacteria 92 6.53e-20   NR HEY4505456.1 2053589 g5280 i0 84.7 5.93220338983051 59 9 100 0 177 1 131 189 HEY4505456.1 lipid II flippase MurJ [Candidatus Paceibacterota bacterium] diamond 1050 92 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;