RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA512103" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA512103 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29476809 29476809 PRJNA512103_P_NODE_14170_length_279_cov_1.182609_g13758_i0 PRJNA512103 14170 279 1.182609 3.29947911 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 54.7 3.35e-6   NR XP_006824476.1 10224 g13758 i0 31.1 2.13978494623656 103 60 98.9 2 2 277 13 115 XP_006824476.1 PREDICTED: vacuolar protein-sorting-associated protein 36-like [Saccoglossus kowalevskii] diamond 597 54.7 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;