contig_metadata
16 rows where bioproject = "PRJNA512103" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4939104 | 4939104 | PRJNA512103_P_NODE_29984_length_170_cov_1.958678_g29572_i0 | PRJNA512103 | 29984 | 170 | 1.958678 | 3.3297526 | Bacillati | 1783272 | Bacteria | Bacteria | 143 | 8.2e-30 | NTclustered | gi|2753147090|gb|CP148032.1| | 55583 | g29572 | i0 | 86.923 | 92.7294117647059 | 130 | 13 | 75 | 4 | 16 | 142 | 233546 | 233418 | MAG: Dehalobacter restrictus isolate SAD chromosome, complete genome | blastn | 15764 | 143 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Desulfitobacteriaceae | Dehalobacter | Dehalobacter restrictus | ||
| 8763855 | 8763855 | PRJNA512103_P_NODE_17207_length_238_cov_1.190476_g16795_i0 | PRJNA512103 | 17207 | 238 | 1.190476 | 2.83333288 | Streptococcus | 1301 | Bacteria | Bacteria | 407 | 3.9599999999999994e-109 | NTclustered | gi|2246565702|gb|CP097843.1| | 1303 | g16795 | i0 | 100 | 394.802521008403 | 220 | 0 | 92 | 0 | 10 | 229 | 18061 | 17842 | Streptococcus oralis strain HP01 chromosome, complete genome | blastn | 93963 | 407 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 10039394 | 10039394 | PRJNA512103_P_NODE_24288_length_191_cov_1.577465_g23876_i0 | PRJNA512103 | 24288 | 191 | 1.577465 | 3.01295815 | root | 1 | Root_unresolved | Root_unresolved | 320 | 4.08e-83 | NTclustered | gi|2450068752|gb|OQ540790.1| | 1303 | g23876 | i0 | 100 | 90.5759162303665 | 173 | 0 | 91 | 0 | 10 | 182 | 443 | 271 | Streptococcus oralis strain DM3 16S ribosomal RNA gene, partial sequence | blastn | 17300 | 320 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 11314038 | 11314038 | PRJNA512103_P_NODE_31629_length_167_cov_1.042373_g31217_i0 | PRJNA512103 | 31629 | 167 | 1.042373 | 1.74076291 | Peribacillus | 2675229 | Bacteria | Bacteria | 281 | 1.64e-71 | NTclustered | gi|1002184699|gb|CP011009.1| | 1478 | g31217 | i0 | 98.734 | 965.784431137725 | 158 | 2 | 95 | 0 | 1 | 158 | 165685 | 165842 | Bacillus simplex strain SH-B26 plasmid pSHB26, complete sequence | blastn | 161286 | 281 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Peribacillus | Peribacillus simplex | ||
| 12589807 | 12589807 | PRJNA512103_P_NODE_22830_length_198_cov_1.060403_g22418_i0 | PRJNA512103 | 22830 | 198 | 1.060403 | 2.09959794 | root | 1 | Root_unresolved | Root_unresolved | 364 | 1.9399999999999995e-96 | NTclustered | gi|1796975023|gb|CP033086.1| | 1280 | g22418 | i0 | 100 | 26.6565656565657 | 197 | 0 | 99 | 0 | 2 | 198 | 2428000 | 2428196 | Staphylococcus aureus strain WH9628 chromosome | blastn | 5278 | 364 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 13864646 | 13864646 | PRJNA512103_P_NODE_8031_length_451_cov_2.368159_g7622_i0 | PRJNA512103 | 8031 | 451 | 2.368159 | 10.68039709 | Bacillati | 1783272 | Bacteria | Bacteria | 817 | 0 | NTclustered | gi|2328902616|gb|CP110363.1| | 1604 | g7622 | i0 | 100 | 369.155210643015 | 442 | 0 | 98 | 0 | 10 | 451 | 652485 | 652926 | Lactobacillus amylovorus strain CICC 6090 chromosome, complete genome | blastn | 166489 | 817 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus amylovorus | ||
| 15138913 | 15138913 | PRJNA512103_P_NODE_18752_length_225_cov_0.909091_g18340_i0 | PRJNA512103 | 18752 | 225 | 0.909091 | 2.04545475 | Streptococcus | 1301 | Bacteria | Bacteria | 357 | 3.79e-94 | NTclustered | gi|926460225|gb|CP012588.1| | 1308 | g18340 | i0 | 97.596 | 511.226666666667 | 208 | 5 | 92 | 0 | 9 | 216 | 162489 | 162696 | Streptococcus thermophilus strain MN-BM-A01, complete genome | blastn | 115026 | 357 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus thermophilus | ||
| 17688731 | 17688731 | PRJNA512103_P_NODE_32894_length_165_cov_0.896552_g32482_i0 | PRJNA512103 | 32894 | 165 | 0.896552 | 1.4793108 | Staphylococcus | 1279 | Bacteria | Bacteria | 268 | 1.26e-67 | NTclustered | gi|1848617844|gb|CP053957.1| | 29388 | g32482 | i0 | 99.324 | 77.4969696969697 | 148 | 1 | 90 | 0 | 10 | 157 | 1958160 | 1958013 | Staphylococcus capitis strain FDAARGOS_753 chromosome, complete genome | blastn | 12787 | 268 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus capitis | ||
| 18337172 | 18337172 | PRJNA512103_P_NODE_12695_length_308_cov_1.370656_g12283_i0 | PRJNA512103 | 12695 | 308 | 1.370656 | 4.22162048 | Hathewaya histolytica | 1498 | Bacteria | Bacteria | 198 | 3.4899999999999993e-46 | NTclustered | gi|1640036048|emb|LR590481.1| | 1498 | g12283 | i0 | 81.59 | 27.7402597402597 | 239 | 44 | 78 | 0 | 68 | 306 | 1403202 | 1403440 | Hathewaya histolytica strain NCTC503 genome assembly, chromosome: 1 | blastn | 8544 | 198 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Hathewaya | Hathewaya histolytica | ||
| 22162661 | 22162661 | PRJNA512103_P_NODE_21418_length_206_cov_0.942675_g21006_i0 | PRJNA512103 | 21418 | 206 | 0.942675 | 1.9419105 | Paenibacillus urinalis | 521520 | Bacteria | Bacteria | 65.8 | 2.31e-6 | NTclustered | gi|2446590601|gb|CP118106.1| | 521520 | g21006 | i0 | 85.075 | 19.0582524271845 | 67 | 7 | 32 | 3 | 20 | 84 | 2087659 | 2087724 | Paenibacillus urinalis strain 2022CK-00833 chromosome, complete genome | blastn | 3926 | 65.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus urinalis | ||
| 22787892 | 22787892 | PRJNA512103_P_NODE_13858_length_285_cov_0.987288_g13446_i0 | PRJNA512103 | 13858 | 285 | 0.987288 | 2.8137708 | root | 1 | Root_unresolved | Root_unresolved | 54.7 | 0.007 | NTclustered | gi|975008075|gb|CP011146.1| | 1396 | g13446 | i0 | 100 | 0.792982456140351 | 29 | 0 | 10 | 0 | 190 | 218 | 237600 | 237628 | Bacillus cereus strain FORC_013 plasmid pFORC13, complete sequence | blastn | 226 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus cereus | ||
| 26824137 | 26824137 | PRJNA512103_P_NODE_27381_length_179_cov_1.346154_g26969_i0 | PRJNA512103 | 27381 | 179 | 1.346154 | 2.40961566 | Paenibacillus sp. 1 | 198340 | Bacteria | Bacteria | 41.6 | 0.0378 | NR | WP_119801618.1 | 1675787 | g26969 | i0 | 45.5 | 0.737430167597765 | 44 | 21 | 68.7 | 1 | 167 | 45 | 118 | 161 | WP_119801618.1 FAD-dependent oxidoreductase [Paenibacillus sp. 1011MAR3C5] | diamond | 132 | 41.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus sp. 1011MAR3C5 | ||
| 26965967 | 26965967 | PRJNA512103_P_NODE_19082_length_222_cov_1.057803_g18670_i0 | PRJNA512103 | 19082 | 222 | 1.057803 | 2.34832266 | root | 1 | Root_unresolved | Root_unresolved | 150 | 1.73e-45 | NR | WP_279750363.1 | 1280 | g18670 | i0 | 98.6 | 92.972972972973 | 73 | 1 | 98.6 | 0 | 1 | 219 | 10 | 82 | WP_279750363.1 50S ribosomal protein L37Ae, partial [Staphylococcus aureus] | diamond | 20640 | 151 | 0.993377483443709 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 28245500 | 28245500 | PRJNA512103_P_NODE_34906_length_156_cov_2.074766_g34494_i0 | PRJNA512103 | 34906 | 156 | 2.074766 | 3.23663496 | Clostridium sp. OF13-4 | 2293040 | Bacteria | Bacteria | 55.5 | 2.83e-8 | NR | RHV70535.1 | 2293040 | g34494 | i0 | 61.7 | 0.903846153846154 | 47 | 18 | 90.4 | 0 | 14 | 154 | 4 | 50 | RHV70535.1 hypothetical protein DXB05_14070, partial [Clostridium sp. OF13-4] | diamond | 141 | 55.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium sp. OF13-4 | ||
| 31341141 | 31341141 | PRJNA512103_P_NODE_34076_length_163_cov_0.877193_g33664_i0 | PRJNA512103 | 34076 | 163 | 0.877193 | 1.42982459 | Halanaerobiales bacterium | 2094029 | Bacteria | Bacteria | 54.7 | 7.74e-7 | NR | MBS3812162.1 | 2094029 | g33664 | i0 | 61.9 | 0.773006134969325 | 42 | 13 | 71.8 | 1 | 130 | 14 | 690 | 731 | MBS3812162.1 hypothetical protein [Halanaerobiales bacterium] | diamond | 126 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Halanaerobiales | Halanaerobiales bacterium | ||||
| 32227052 | 32227052 | PRJNA512103_P_NODE_21098_length_208_cov_0.874214_g20686_i0 | PRJNA512103 | 21098 | 208 | 0.874214 | 1.81836512 | Negativicutes bacterium | 2499140 | Bacteria | Bacteria | 43.5 | 0.00633 | NR | MDR3563352.1 | 2499140 | g20686 | i0 | 44.6 | 0.807692307692308 | 56 | 28 | 80.8 | 2 | 12 | 179 | 78 | 130 | MDR3563352.1 hypothetical protein [Negativicutes bacterium] | diamond | 168 | 43.5 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Negativicutes bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;