RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA512103" and tax_phylum = "Abditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA512103 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3036518 3036518 PRJNA512103_P_NODE_10763_length_353_cov_1.861842_g10351_i0 PRJNA512103 10763 353 1.861842 6.57230226 Abditibacteriota bacterium 2783868 Bacteria Bacteria 243 1.8500000000000002e-59   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g10351 i0 79.718 270.909348441926 355 57 99 13 6 353 2852360 2852014 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 95631 243 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
5590190 5590190 PRJNA512103_P_NODE_4685_length_702_cov_2.704441_g4314_i0 PRJNA512103 4685 702 2.704441 18.98517582 Abditibacteriota bacterium 2783868 Bacteria Bacteria 797 0   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g4314 i0 87.717 194.092592592593 692 74 97 10 10 693 2852006 2851318 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 136253 797 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;