contig_metadata
5 rows where bioproject = "PRJNA512103", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9414651 | 9414651 | PRJNA512103_P_NODE_7228_length_494_cov_1.370787_g6821_i0 | PRJNA512103 | 7228 | 494 | 1.370787 | 6.77168778 | Caenorhabditis elegans | 6239 | Nematoda | Nematoda | 126 | 2.7999999999999998e-24 | NTclustered | gi|341353|gb|M25474.1|CELTGMETC | 6239 | g6821 | i0 | 89.32 | 16.7429149797571 | 103 | 8 | 21 | 3 | 273 | 374 | 43 | 143 | Caenorhabditis elegans transfer RNA-Met (Met-tRNA3) gene | blastn | 8271 | 126 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans | |
| 27060930 | 27060930 | PRJNA512103_P_NODE_34822_length_158_cov_2.027523_g34410_i0 | PRJNA512103 | 34822 | 158 | 2.027523 | 3.20348634 | Rhabditida | 6236 | Nematoda | Nematoda | 92.4 | 1.07e-20 | NR | KAF8366168.1 | 54126 | g34410 | i0 | 87.8 | 13.0253164556962 | 49 | 6 | 93 | 0 | 157 | 11 | 236 | 284 | KAF8366168.1 hypothetical protein PRIPAC_83997, partial [Pristionchus pacificus] | diamond | 2058 | 92.8 | 0.995689655172414 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus pacificus | |
| 27330144 | 27330144 | PRJNA512103_P_NODE_26123_length_184_cov_1.096296_g25711_i0 | PRJNA512103 | 26123 | 184 | 1.096296 | 2.01718464 | Diploscapter pachys | 2018661 | Nematoda | Nematoda | 68.6 | 1.36e-11 | NR | PAV58677.1 | 2018661 | g25711 | i0 | 55.8 | 0.847826086956522 | 52 | 23 | 84.8 | 0 | 171 | 16 | 1541 | 1592 | PAV58677.1 hypothetical protein WR25_10059 [Diploscapter pachys] | diamond | 156 | 68.6 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Diploscapter | Diploscapter pachys | |
| 29445336 | 29445336 | PRJNA512103_P_NODE_29390_length_172_cov_1.617886_g28978_i0 | PRJNA512103 | 29390 | 172 | 1.617886 | 2.78276392 | Meloidogyne enterolobii | 390850 | Nematoda | Nematoda | 45.1 | 7.36e-4 | NR | CAD2154511.1 | 390850 | g28978 | i0 | 42.9 | 0.976744186046512 | 56 | 20 | 90.7 | 2 | 10 | 165 | 5 | 52 | CAD2154511.1 unnamed protein product [Meloidogyne enterolobii] | diamond | 168 | 45.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Meloidogynidae | Meloidogyne | Meloidogyne enterolobii | |
| 29634585 | 29634585 | PRJNA512103_P_NODE_17070_length_239_cov_2.721053_g16658_i0 | PRJNA512103 | 17070 | 239 | 2.721053 | 6.50331667 | Brugia malayi | 6279 | Nematoda | Nematoda | 42.4 | 0.00973 | NR | CDP90914.1 | 6279 | g16658 | i0 | 74.1 | 0.338912133891213 | 27 | 7 | 33.9 | 0 | 101 | 181 | 15 | 41 | CDP90914.1 Bm13240 [Brugia malayi] | diamond | 81 | 42.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Onchocercidae | Brugia | Brugia malayi |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;