RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA512103", tax_kingdom = "Fungi" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA512103 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5589884 5589884 PRJNA512103_P_NODE_27725_length_178_cov_1.139535_g27313_i0 PRJNA512103 27725 178 1.139535 2.0283723 Cutaneotrichosporon cavernicola 279322 Fungi Fungi 93.5 8.87e-15   NTclustered gi|2612486239|ref|XM_060598681.1| 279322 g27313 i0 89.333 0.831460674157303 75 7 42 1 46 120 226 299 Cutaneotrichosporon cavernicola uncharacterized protein (RPL25), partial mRNA blastn 148 93.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Cutaneotrichosporon Cutaneotrichosporon cavernicola
8139209 8139209 PRJNA512103_P_NODE_28787_length_174_cov_2.080000_g28375_i0 PRJNA512103 28787 174 2.08 3.6192 Cutaneotrichosporon cavernicola 279322 Fungi Fungi 119 1.42e-22   NTclustered gi|2612479551|ref|XM_060596658.1| 279322 g28375 i0 85 46.1954022988506 120 14 68 4 55 172 277 394 Cutaneotrichosporon cavernicola uncharacterized protein (MDH1), partial mRNA blastn 8038 119 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Cutaneotrichosporon Cutaneotrichosporon cavernicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;