RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA512103" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 2 ✖

bioproject 1

  • PRJNA512103 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6864256 6864256 PRJNA512103_P_NODE_7186_length_496_cov_2.210291_g6779_i0 PRJNA512103 7186 496 2.210291 10.96304336 root 1 Root_unresolved Root_unresolved 233 1.01e-70   NR KAI8467676.1 39955 g6779 i0 74.5 52.9899193548387 153 39 92.5 0 9 467 354 506 KAI8467676.1 MAG: ATP synthase subunit beta, mitochondrial [Monoraphidium minutum] diamond 26283 234 0.995726495726496 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium minutum
30850808 30850808 PRJNA512103_P_NODE_27354_length_179_cov_1.446154_g26942_i0 PRJNA512103 27354 179 1.446154 2.58861566 Eukaryota 2759 Plants Plants 54.3 1.52e-7   NR KAK9812718.1 41462 g26942 i0 54.3 8.11173184357542 46 21 77.1 0 11 148 62 107 KAK9812718.1 hypothetical protein WJX72_002574 [[Myrmecia] bisecta] diamond 1452 54.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;