RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA512103", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA512103 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21512811 21512811 PRJNA512103_P_NODE_2097_length_1218_cov_2.473909_g1876_i0 PRJNA512103 2097 1218 2.473909 30.13221162 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 60.2 7.43e-4   NTclustered gi|2785757308|ref|XM_067215750.1| 5824 g1876 i0 100 0.0525451559934319 32 0 3 0 492 523 914 883 Plasmodium brasilianum Cg2 protein (MKS88_000468), partial mRNA blastn 64 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum
30425147 30425147 PRJNA512103_P_NODE_12853_length_305_cov_0.972656_g12441_i0 PRJNA512103 12853 305 0.972656 2.9666008 Cryptosporidium bovis 310047 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0395   NR XP_067182747.1 310047 g12441 i0 40.5 0.413114754098361 42 25 41.3 0 83 208 141 182 XP_067182747.1 membrane associated with a RING finger [Cryptosporidium bovis] diamond 126 43.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium bovis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;