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contig_metadata

29 rows where bioproject = "PRJNA512103" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 29 ✖

bioproject 1

  • PRJNA512103 · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1760742 1760742 PRJNA512103_P_NODE_12902_length_304_cov_0.956863_g12490_i0 PRJNA512103 12902 304 0.956863 2.90886352 Labyrinthula sp. 1678526 SAR_Eukaryotes SAR_Eukaryotes 138 7.2e-37   NR QOW07434.1 1678526 g12490 i0 73.1 2.76315789473684 93 25 91.8 0 20 298 8 100 QOW07434.1 NADH dehydrogenase subunit 7 [Labyrinthula sp.] diamond 840 138 1 Eukaryota Sar     Bigyra Labyrinthulida Labyrinthulaceae Labyrinthula Labyrinthula sp.
4939110 4939110 PRJNA512103_P_NODE_8304_length_439_cov_1.979487_g7893_i0 PRJNA512103 8304 439 1.979487 8.68994793 Bigyra 2683628 SAR_Eukaryotes SAR_Eukaryotes 272 2.99e-68   NTclustered gi|855314976|ref|XM_013043241.1| 12968 g7893 i0 79.389 88.2847380410023 393 75 89 3 41 430 834 445 Blastocystis hominis mRNA blastn 38757 272 1 Eukaryota Sar     Bigyra Opalinata Blastocystidae Blastocystis Blastocystis hominis
8139460 8139460 PRJNA512103_P_NODE_4507_length_723_cov_2.879822_g4144_i0 PRJNA512103 4507 723 2.879822 20.82111306 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 288 1.9e-94   NR YP_005090289.1 2829 g4144 i0 62.1 19.2448132780083 232 88 96.3 0 6 701 40 271 YP_005090289.1 cytochrome c oxidase subunit III [Heterosigma akashiwo] diamond 13914 288 1 Eukaryota Sar     Raphidophyceae Chattonellales Chattonellaceae Heterosigma Heterosigma akashiwo
13240038 13240038 PRJNA512103_P_NODE_29051_length_173_cov_2.274194_g28639_i0 PRJNA512103 29051 173 2.274194 3.93435562 Diplophrys mutabilis 1407010 SAR_Eukaryotes SAR_Eukaryotes 285 1.32e-72   NTclustered gi|550533550|dbj|AB856527.1| 1407010 g28639 i0 100 24.8670520231214 154 0 89 0 11 164 1493 1646 Diplophrys mutabilis gene for 18S ribosomal RNA, partial sequence blastn 4302 285 1 Eukaryota Sar     Bigyra Amphitremida   Diplophrys Diplophrys mutabilis
14514383 14514383 PRJNA512103_P_NODE_11292_length_339_cov_2.427586_g10880_i0 PRJNA512103 11292 339 2.427586 8.22951654 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 595 1.1799999999999996e-165   NTclustered gi|238617602|gb|FJ973377.1| 188950 g10880 i0 99.39 96.9616519174041 328 2 97 0 3 330 11 338 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 32870 595 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
15788957 15788957 PRJNA512103_P_NODE_32813_length_165_cov_0.896552_g32401_i0 PRJNA512103 32813 165 0.896552 1.4793108 Triparma 722752 SAR_Eukaryotes SAR_Eukaryotes 102 2.1e-25   NR GMI08560.1 1606542 g32401 i0 92 4.54545454545455 50 4 90.9 0 11 160 77 126 GMI08560.1 hypothetical protein TrVE_jg6717 [Triparma verrucosa] diamond 750 102 1 Eukaryota Sar     Bolidophyceae Parmales Triparmaceae Triparma Triparma verrucosa
15789054 15789054 PRJNA512103_P_NODE_4113_length_777_cov_3.453297_g3764_i0 PRJNA512103 4113 777 3.453297 26.83211769 Thraustochytriidae 33674 SAR_Eukaryotes SAR_Eukaryotes 289 4.7499999999999987e-95   NR AAG23676.1 42467 g3764 i0 58.9 1.78378378378378 231 90 87.3 2 40 717 9 239 AAG23676.1 cytochrome c oxidase subunit 2 [Thraustochytrium aureum] diamond 1386 291 0.993127147766323 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Thraustochytrium Thraustochytrium aureum
17062688 17062688 PRJNA512103_P_NODE_10254_length_368_cov_2.426332_g9842_i0 PRJNA512103 10254 368 2.426332 8.92890176 Diplophrys mutabilis 1407010 SAR_Eukaryotes SAR_Eukaryotes 566 1.0099999999999999e-156   NTclustered gi|550533550|dbj|AB856527.1| 1407010 g9842 i0 95.278 50.3994565217391 360 12 97 5 1 356 1660 2018 Diplophrys mutabilis gene for 18S ribosomal RNA, partial sequence blastn 18547 566 1 Eukaryota Sar     Bigyra Amphitremida   Diplophrys Diplophrys mutabilis
17063337 17063337 PRJNA512103_P_NODE_2774_length_1015_cov_4.642857_g2502_i0 PRJNA512103 2774 1015 4.642857 47.12499855 Diplophrys mutabilis 1407010 SAR_Eukaryotes SAR_Eukaryotes 1099 0   NTclustered gi|550533550|dbj|AB856527.1| 1407010 g2502 i0 86.403 36.6394088669951 1037 84 99 32 1 1006 1333 323 Diplophrys mutabilis gene for 18S ribosomal RNA, partial sequence blastn 37189 1099 1 Eukaryota Sar     Bigyra Amphitremida   Diplophrys Diplophrys mutabilis
17063598 17063598 PRJNA512103_P_NODE_3714_length_836_cov_1.437103_g3390_i0 PRJNA512103 3714 836 1.437103 12.01418108 Hondaea fermentalgiana 2315210 SAR_Eukaryotes SAR_Eukaryotes 286 9.63e-91   NR GBG24767.1 2315210 g3390 i0 56.4 1.97727272727273 275 119 98.7 1 834 10 86 359 GBG24767.1 Coronin-like protein [Hondaea fermentalgiana] diamond 1653 286 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Hondaea Hondaea fermentalgiana
21512811 21512811 PRJNA512103_P_NODE_2097_length_1218_cov_2.473909_g1876_i0 PRJNA512103 2097 1218 2.473909 30.13221162 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 60.2 7.43e-4   NTclustered gi|2785757308|ref|XM_067215750.1| 5824 g1876 i0 100 0.0525451559934319 32 0 3 0 492 523 914 883 Plasmodium brasilianum Cg2 protein (MKS88_000468), partial mRNA blastn 64 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum
22787900 22787900 PRJNA512103_P_NODE_29278_length_173_cov_0.951613_g28866_i0 PRJNA512103 29278 173 0.951613 1.64629049 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 154 3.87e-33   NTclustered gi|325181596|emb|FR824063.1| 890382 g28866 i0 84.516 128.410404624277 155 24 90 0 19 173 56455 56301 Albugo laibachii Nc14, genomic contig CONTIG_18_NC14_v4_198151_220 blastn 22215 154 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
24712511 24712511 PRJNA512103_P_NODE_6160_length_562_cov_2.191033_g5761_i0 PRJNA512103 6160 562 2.191033 12.31360546 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 226 1.1e-66   NR ACS27121.1 2829 g5761 i0 65.4 31.6281138790036 179 62 95.6 0 10 546 239 417 ACS27121.1 NADH dehydrogenase subunit 5 [Heterosigma akashiwo] diamond 17775 228 0.991228070175439 Eukaryota Sar     Raphidophyceae Chattonellales Chattonellaceae Heterosigma Heterosigma akashiwo
26918992 26918992 PRJNA512103_P_NODE_4102_length_779_cov_1.753425_g3753_i0 PRJNA512103 4102 779 1.753425 13.65918075 Labyrinthula sp. 1678526 SAR_Eukaryotes SAR_Eukaryotes 168 1.4e-47   NR QOW07447.1 1678526 g3753 i0 45.3 0.978177150192555 254 113 91.7 4 777 64 7 250 QOW07447.1 ATP synthase F0 subunit a, partial [Labyrinthula sp.] diamond 762 168 1 Eukaryota Sar     Bigyra Labyrinthulida Labyrinthulaceae Labyrinthula Labyrinthula sp.
27266833 27266833 PRJNA512103_P_NODE_11223_length_341_cov_1.373288_g10811_i0 PRJNA512103 11223 341 1.373288 4.68291208 Hondaea fermentalgiana 2315210 SAR_Eukaryotes SAR_Eukaryotes 109 2.0500000000000003e-27   NR GBG25317.1 2315210 g10811 i0 82.5 0.501466275659824 57 10 50.1 0 164 334 57 113 GBG25317.1 Ubiquitin-conjugating enzyme family protein [Hondaea fermentalgiana] diamond 171 109 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Hondaea Hondaea fermentalgiana
27929998 27929998 PRJNA512103_P_NODE_24385_length_191_cov_1.035211_g23973_i0 PRJNA512103 24385 191 1.035211 1.97725301 Hondaea fermentalgiana 2315210 SAR_Eukaryotes SAR_Eukaryotes 96.3 1.5600000000000002e-21   NR GBG24679.1 2315210 g23973 i0 69.6 0.879581151832461 56 17 88 0 11 178 122 177 GBG24679.1 Aspartate aminotransferase, mitochondrial [Hondaea fermentalgiana] diamond 168 96.3 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Hondaea Hondaea fermentalgiana
28245502 28245502 PRJNA512103_P_NODE_6886_length_515_cov_1.804721_g6481_i0 PRJNA512103 6886 515 1.804721 9.29431315 Hondaea fermentalgiana 2315210 SAR_Eukaryotes SAR_Eukaryotes 147 1.45e-41   NR GBG31757.1 2315210 g6481 i0 45.3 1.84660194174757 161 82 90.9 2 6 473 3 162 GBG31757.1 60S ribosomal protein L27 [Hondaea fermentalgiana] diamond 951 147 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Hondaea Hondaea fermentalgiana
29540134 29540134 PRJNA512103_P_NODE_19690_length_217_cov_1.077381_g19278_i0 PRJNA512103 19690 217 1.077381 2.33791677 Hondaea fermentalgiana 2315210 SAR_Eukaryotes SAR_Eukaryotes 47.4 6.01e-4   NR GBG34315.1 2315210 g19278 i0 37.7 0.732718894009217 53 33 73.3 0 12 170 8 60 GBG34315.1 Hypothetical Protein FCC1311_105382 [Hondaea fermentalgiana] diamond 159 47.4 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Hondaea Hondaea fermentalgiana
29697710 29697710 PRJNA512103_P_NODE_9990_length_376_cov_6.189602_g9578_i0 PRJNA512103 9990 376 6.189602 23.27290352 Thraustochytrium aureum 42467 SAR_Eukaryotes SAR_Eukaryotes 105 3.4600000000000005e-27   NR AAG23688.1 42467 g9578 i0 78.9 1.13297872340426 71 15 56.6 0 284 72 5 75 AAG23688.1 ATP synthase F0 subunit 9 [Thraustochytrium aureum] diamond 426 105 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Thraustochytrium Thraustochytrium aureum
29871477 29871477 PRJNA512103_P_NODE_30211_length_170_cov_1.074380_g29799_i0 PRJNA512103 30211 170 1.07438 1.826446 root 1 Root_unresolved Root_unresolved 75.5 3.58e-14   NR GFH45819.1 426638 g29799 i0 61.5 16.6764705882353 52 20 91.8 0 158 3 7 58 GFH45819.1 argininosuccinate synthase [Chaetoceros tenuissimus] diamond 2835 75.5 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus
30425147 30425147 PRJNA512103_P_NODE_12853_length_305_cov_0.972656_g12441_i0 PRJNA512103 12853 305 0.972656 2.9666008 Cryptosporidium bovis 310047 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0395   NR XP_067182747.1 310047 g12441 i0 40.5 0.413114754098361 42 25 41.3 0 83 208 141 182 XP_067182747.1 membrane associated with a RING finger [Cryptosporidium bovis] diamond 126 43.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium bovis
30819288 30819288 PRJNA512103_P_NODE_22834_length_198_cov_1.000000_g22422_i0 PRJNA512103 22834 198 1 1.98 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 99.4 2.1699999999999998e-23   NR XP_012894128.1 12968 g22422 i0 72.9 1.78787878787879 59 16 89.4 0 187 11 116 174 XP_012894128.1 Dihydroorotate oxydase [Blastocystis hominis] diamond 354 99.4 1 Eukaryota Sar     Bigyra Opalinata Blastocystidae Blastocystis Blastocystis hominis
30850809 30850809 PRJNA512103_P_NODE_33934_length_163_cov_0.912281_g33522_i0 PRJNA512103 33934 163 0.912281 1.48701803 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 57 1.12e-8   NR KAG5190125.1 303371 g33522 i0 58.3 3.6441717791411 48 20 88.3 0 10 153 55 102 KAG5190125.1 ribosomal protein S25 [Tribonema minus] diamond 594 57.4 0.993031358885017 Eukaryota Sar     Xanthophyceae Tribonematales Tribonemataceae Tribonema Tribonema minus
31419720 31419720 PRJNA512103_P_NODE_18836_length_224_cov_1.045714_g18424_i0 PRJNA512103 18836 224 1.045714 2.34239936 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 114 1.27e-27   NR YP_448707.1 2876 g18424 i0 76.1 15.2142857142857 71 17 95.1 0 222 10 102 172 YP_448707.1 NADH dehydrogenase subunit 5 [Dictyota dichotoma] diamond 3408 115 0.991304347826087 Eukaryota Sar     Phaeophyceae Dictyotales Dictyotaceae Dictyota Dictyota dichotoma
31483291 31483291 PRJNA512103_P_NODE_20016_length_214_cov_2.096970_g19604_i0 PRJNA512103 20016 214 2.09697 4.4875158 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 92.4 4.54e-20   NR XAL83106.1 568390 g19604 i0 64.6 7.28971962616822 65 23 91.1 0 205 11 167 231 XAL83106.1 NADH dehydrogenase subunit 7 [Leukarachnion sp. ATCC PRA-24] diamond 1560 92.8 0.995689655172414 Eukaryota Sar             Leukarachnion sp. ATCC PRA-24
31878663 31878663 PRJNA512103_P_NODE_24517_length_190_cov_1.574468_g24105_i0 PRJNA512103 24517 190 1.574468 2.9914892 Hondaea fermentalgiana 2315210 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.00396   NR GBG34049.1 2315210 g24105 i0 38.3 1.87894736842105 60 36 93.2 1 5 181 515 574 GBG34049.1 Hypothetical Protein FCC1311_102722 [Hondaea fermentalgiana] diamond 357 44.7 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Hondaea Hondaea fermentalgiana
32005456 32005456 PRJNA512103_P_NODE_31218_length_168_cov_0.873950_g30806_i0 PRJNA512103 31218 168 0.87395 1.468236 Nitzschia inconspicua 303405 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0102   NR KAG7362074.1 303405 g30806 i0 41.9 0.767857142857143 43 25 76.8 0 168 40 201 243 KAG7362074.1 FMN-dependent dehydrogenase [Nitzschia inconspicua] diamond 129 43.1 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
32337461 32337461 PRJNA512103_P_NODE_14999_length_266_cov_1.230415_g14587_i0 PRJNA512103 14999 266 1.230415 3.2729039 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 127 9.04e-33   NR NP_037607.1 4787 g14587 i0 76.8 3.65413533834586 82 19 92.5 0 21 266 92 173 NP_037607.1 NADH dehydrogenase subunit 7 [Phytophthora infestans] diamond 972 127 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
32637611 32637611 PRJNA512103_P_NODE_10340_length_366_cov_1.321767_g9928_i0 PRJNA512103 10340 366 1.321767 4.83766722 Hondaea fermentalgiana 2315210 SAR_Eukaryotes SAR_Eukaryotes 119 2e-31   NR GBG25401.1 2315210 g9928 i0 56.8 0.967213114754098 118 44 91 1 341 9 9 126 GBG25401.1 60S ribosomal protein L12 [Hondaea fermentalgiana] diamond 354 119 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Hondaea Hondaea fermentalgiana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;