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contig_metadata

25 rows where bioproject = "PRJNA512103" and tax_clade = "Embryophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 25 ✖

bioproject 1

  • PRJNA512103 · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
485956 485956 PRJNA512103_P_NODE_24941_length_189_cov_0.892857_g24529_i0 PRJNA512103 24941 189 0.892857 1.68749973 Cucumis melo 3656 Plants Plants 52.8 0.016   NTclustered gi|733591487|emb|LN681811.1| 3656 g24529 i0 100 0.296296296296296 28 0 15 0 103 130 125341 125368 Cucumis melo genomic scaffold, anchoredscaffold00069 blastn 56 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucumis Cucumis melo
1110865 1110865 PRJNA512103_P_NODE_17461_length_235_cov_2.586022_g17049_i0 PRJNA512103 17461 235 2.586022 6.0771517 Poaceae 4479 Plants Plants 398 2.349999999999999e-106   NTclustered gi|1995660796|pdb|4V3P|L1 4565 g17049 i0 99.541 2224.14893617021 218 1 93 0 10 227 1891 2108 Chain L1, 26S ribosomal RNA blastn 522675 398 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
2386376 2386376 PRJNA512103_P_NODE_29122_length_173_cov_1.467742_g28710_i0 PRJNA512103 29122 173 1.467742 2.53919366 Glycine 3846 Plants Plants 287 3.6600000000000005e-73   NTclustered gi|37495450|emb|AJ583799.1| 3847 g28710 i0 100 21.4971098265896 155 0 90 0 10 164 628 474 Glycine max lea-D-11 gene for dehydrin, cultivar Cuc Vang blastn 3719 287 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Glycine Glycine max
3662123 3662123 PRJNA512103_P_NODE_19723_length_216_cov_5.143713_g19311_i0 PRJNA512103 19723 216 5.143713 11.11042008 Glycine 3846 Plants Plants 381 2.139999999999999e-101   NTclustered gi|2027446350|ref|XR_005890558.1| 3847 g19311 i0 100 95.4537037037037 206 0 95 0 10 215 3114 3319 PREDICTED: Glycine max 28S ribosomal RNA (LOC121174465), rRNA blastn 20618 381 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Glycine Glycine max
4312420 4312420 PRJNA512103_P_NODE_13164_length_298_cov_1.180723_g12752_i0 PRJNA512103 13164 298 1.180723 3.51855454 Phalaenopsis equestris 78828 Plants Plants 52.8 0.028   NTclustered gi|1175831788|ref|XM_020737576.1| 78828 g12752 i0 100 0.187919463087248 28 0 9 0 84 111 830 803 PREDICTED: Phalaenopsis equestris uncharacterized LOC110033551 (LOC110033551), mRNA blastn 56 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Orchidaceae Phalaenopsis Phalaenopsis equestris
4939099 4939099 PRJNA512103_P_NODE_18084_length_230_cov_1.176796_g17672_i0 PRJNA512103 18084 230 1.176796 2.7066308 Glycine 3846 Plants Plants 313 8.53e-81   NTclustered gi|2027472501|ref|XM_003526189.5| 3847 g17672 i0 95.408 9.88695652173913 196 9 96 0 35 230 2194 1999 PREDICTED: Glycine max seed biotin-containing protein SBP65 (LOC100780139), mRNA blastn 2274 313 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Glycine Glycine max
7488935 7488935 PRJNA512103_P_NODE_24486_length_190_cov_1.794326_g24074_i0 PRJNA512103 24486 190 1.794326 3.4092194 Poaceae 4479 Plants Plants 294 2.46e-75   NTclustered gi|2022331886|ref|XR_005813456.1| 4533 g24074 i0 100 953.536842105263 159 0 84 0 23 181 1456 1298 PREDICTED: Oryza brachyantha 28S ribosomal RNA (LOC121056681), rRNA blastn 181172 296 0.993243243243243 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza brachyantha
9414000 9414000 PRJNA512103_P_NODE_20948_length_208_cov_2.025157_g20536_i0 PRJNA512103 20948 208 2.025157 4.21232656 Brassica rapa 3711 Plants Plants 56.5 0.001   NTclustered gi|1827929271|ref|XM_033279585.1| 3711 g20536 i0 100 0.144230769230769 30 0 14 0 58 87 3072 3101 PREDICTED: Brassica rapa uncharacterized LOC103838596 (LOC103838596), mRNA blastn 30 56.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Brassica Brassica rapa
10039398 10039398 PRJNA512103_P_NODE_7308_length_489_cov_2.065909_g6900_i0 PRJNA512103 7308 489 2.065909 10.10229501 Fabaceae 3803 Plants Plants 870 0   NTclustered gi|1418576273|ref|NC_037714.1| 3832 g6900 i0 100 188.78527607362 471 0 96 0 10 480 103598 104068 Cyamopsis tetragonoloba chloroplast, complete genome blastn 92316 870 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Cyamopsis Cyamopsis tetragonoloba
10690026 10690026 PRJNA512103_P_NODE_32629_length_165_cov_1.275862_g32217_i0 PRJNA512103 32629 165 1.275862 2.1051723 Olea europaea 4146 Plants Plants 54.7 0.004   NTclustered gi|1279006580|ref|XM_023007944.1| 158386 g32217 i0 100 1.40606060606061 29 0 18 0 100 128 1141 1113 PREDICTED: Olea europaea var. sylvestris DNA repair protein XRCC2 homolog (LOC111383790), transcript variant X2, mRNA blastn 232 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Olea Olea europaea
11314036 11314036 PRJNA512103_P_NODE_25949_length_185_cov_0.764706_g25537_i0 PRJNA512103 25949 185 0.764706 1.4147061 Glycine 3846 Plants Plants 305 1.1e-78   NTclustered gi|2027488443|ref|XM_003535208.4| 3847 g25537 i0 99.405 8.02162162162162 168 1 91 0 10 177 457 624 PREDICTED: Glycine max late embryogenesis abundant protein At3g53040 (LOC100786618), mRNA blastn 1484 305 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Glycine Glycine max
14515132 14515132 PRJNA512103_P_NODE_30232_length_170_cov_1.033058_g29820_i0 PRJNA512103 30232 170 1.033058 1.7561986 Ipomoea triloba 35885 Plants Plants 152 1.36e-32   NTclustered gi|1766764744|ref|XM_031234826.1| 35885 g29820 i0 83.234 21.2235294117647 167 27 98 1 1 166 324 158 PREDICTED: Ipomoea triloba histone H3.3 (LOC115995716), mRNA blastn 3608 152 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Convolvulaceae Ipomoea Ipomoea triloba
14515150 14515150 PRJNA512103_P_NODE_30772_length_169_cov_0.866667_g30360_i0 PRJNA512103 30772 169 0.866667 1.46466723 Glycine max 3847 Plants Plants 274 2.7699999999999997e-69   NTclustered gi|351724000|ref|NM_001251649.1| 3847 g30360 i0 99.338 22.6804733727811 151 1 89 0 10 160 662 512 Glycine max protein MAT1 (MAT1), mRNA blastn 3833 274 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Glycine Glycine max
15789187 15789187 PRJNA512103_P_NODE_7153_length_498_cov_1.910913_g6746_i0 PRJNA512103 7153 498 1.910913 9.51634674 Elaeis guineensis 51953 Plants Plants 52.8 0.049   NTclustered gi|1658213114|ref|XM_010928681.3| 51953 g6746 i0 96.774 0.0622489959839357 31 1 6 0 200 230 212 242 PREDICTED: Elaeis guineensis aspartyl protease AED3-like (LOC105049122), mRNA blastn 31 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Arecales Arecaceae Elaeis Elaeis guineensis
17688726 17688726 PRJNA512103_P_NODE_24314_length_191_cov_1.394366_g23902_i0 PRJNA512103 24314 191 1.394366 2.66323906 Solanum 4107 Plants Plants 320 4.08e-83   NTclustered gi|1883211983|gb|MT122986.1| 4111 g23902 i0 100 96.1413612565445 173 0 91 0 10 182 295848 295676 Solanum melongena isolate NN5 chromosome 1 mitochondrion, complete sequence blastn 18363 320 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum melongena
20888123 20888123 PRJNA512103_P_NODE_26457_length_183_cov_0.910448_g26045_i0 PRJNA512103 26457 183 0.910448 1.66611984 Vigna mungo 3915 Plants Plants 294 2.35e-75   NTclustered gi|2688608576|gb|CP144701.1| 3915 g26045 i0 98.795 190.726775956284 166 0 90 2 10 174 673590 673754 Vigna mungo isolate Urdbean mitochondrion, partial sequence blastn 34903 294 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Vigna Vigna mungo
22787903 22787903 PRJNA512103_P_NODE_33938_length_163_cov_0.912281_g33526_i0 PRJNA512103 33938 163 0.912281 1.48701803 Glycine 3846 Plants Plants 268 1.24e-67   NTclustered gi|2027469553|ref|XM_003527817.5| 3847 g33526 i0 100 1.77914110429448 145 0 89 0 10 154 2369 2225 PREDICTED: Glycine max purple acid phosphatase 2 (LOC100789918), mRNA blastn 290 268 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Glycine Glycine max
23438551 23438551 PRJNA512103_P_NODE_28339_length_176_cov_1.141732_g27927_i0 PRJNA512103 28339 176 1.141732 2.00944832 Ornithogalum saundersiae 484171 Plants Plants 130 6.670000000000001e-26   NTclustered gi|731910671|gb|KM510380.1| 484171 g27927 i0 83.333 63.3295454545455 144 20 81 4 28 169 958 1099 Galtonia saundersiae actin-2 (Actin2) mRNA, complete cds blastn 11146 130 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Hyacinthaceae Ornithogalum Ornithogalum saundersiae
24062781 24062781 PRJNA512103_P_NODE_17659_length_233_cov_3.565217_g17247_i0 PRJNA512103 17659 233 3.565217 8.30695561 Magnoliopsida 3398 Plants Plants 398 2.32e-106   NTclustered gi|2164447791|gb|OL824850.1| 3528 g17247 i0 100 92.274678111588 215 0 92 0 10 224 1472 1686 Phytolacca acinosa voucher ENC851188 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 21500 398 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Phytolaccaceae Phytolacca Phytolacca acinosa
25337266 25337266 PRJNA512103_P_NODE_20940_length_208_cov_2.383648_g20528_i0 PRJNA512103 20940 208 2.383648 4.95798784 Glycine 3846 Plants Plants 385 1.58e-102   NTclustered gi|2027472501|ref|XM_003526189.5| 3847 g20528 i0 100 6.36538461538461 208 0 100 0 1 208 1702 1909 PREDICTED: Glycine max seed biotin-containing protein SBP65 (LOC100780139), mRNA blastn 1324 385 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Glycine Glycine max
25337267 25337267 PRJNA512103_P_NODE_21960_length_202_cov_1.941176_g21548_i0 PRJNA512103 21960 202 1.941176 3.92117552 root 1 Root_unresolved Root_unresolved 342 9.319999999999999e-90   NTclustered gi|1418576273|ref|NC_037714.1| 3832 g21548 i0 100 172.178217821782 185 0 92 0 9 193 99705 99889 Cyamopsis tetragonoloba chloroplast, complete genome blastn 34780 342 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Cyamopsis Cyamopsis tetragonoloba
28213909 28213909 PRJNA512103_P_NODE_19566_length_218_cov_0.875740_g19154_i0 PRJNA512103 19566 218 0.87574 1.9091132 Actinidia rufa 165716 Plants Plants 43.9 0.0106   NR GFZ12955.1 165716 g19154 i0 37.2 0.591743119266055 43 27 59.2 0 17 145 99 141 GFZ12955.1 formin homology5 [Actinidia rufa] diamond 129 43.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Actinidiaceae Actinidia Actinidia rufa
28498487 28498487 PRJNA512103_P_NODE_30767_length_169_cov_0.866667_g30355_i0 PRJNA512103 30767 169 0.866667 1.46466723 Triticum aestivum 4565 Plants Plants 42 0.0254   NR SPT19547.1 4565 g30355 i0 40.5 0.656804733727811 37 22 65.7 0 18 128 837 873 SPT19547.1 unnamed protein product [Triticum aestivum] diamond 111 42 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
30803837 30803837 PRJNA512103_P_NODE_11194_length_342_cov_1.191126_g10782_i0 PRJNA512103 11194 342 1.191126 4.07365092 Humulus lupulus 3486 Plants Plants 74.3 8.29e-13   NR XP_062118465.1 3486 g10782 i0 35.5 0.815789473684211 93 51 81.6 1 62 340 4 87 XP_062118465.1 uncharacterized mitochondrial protein AtMg00810-like [Humulus lupulus] diamond 279 74.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Humulus Humulus lupulus
32005454 32005454 PRJNA512103_P_NODE_23378_length_195_cov_1.815068_g22966_i0 PRJNA512103 23378 195 1.815068 3.5393826 Prunus armeniaca 36596 Plants Plants 42 0.038   NR CAL2237091.1 36596 g22966 i0 41.9 0.953846153846154 62 36 95.4 0 192 7 361 422 CAL2237091.1 unnamed protein product [Prunus armeniaca] diamond 186 42 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Prunus Prunus armeniaca

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;