RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA509429" and tax_phylum = "Candidatus Campbelliibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Campbelliibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA509429 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8138360 8138360 PRJNA509429_P_NODE_44947_length_166_cov_1.702290_g44119_i0 PRJNA509429 44947 166 1.70229 2.8258014 Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 1618633 Bacteria Bacteria 95.3 2.28e-15   NTclustered gi|837353685|gb|CP011215.1| 1618633 g44119 i0 78.71 19.6506024096386 155 23 91 10 2 152 8460 8608 MAG: Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 chromosome, complete genome blastn 3262 95.3 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium GW2011_OD1_34_28
20887353 20887353 PRJNA509429_P_NODE_44377_length_168_cov_0.902256_g43549_i0 PRJNA509429 44377 168 0.902256 1.51579008 Candidatus Campbellbacteria bacterium 2026716 Bacteria Bacteria 143 8.139999999999998e-30   NTclustered gi|1958034697|gb|CP064977.1| 2026716 g43549 i0 83.436 2.5 163 18 94 9 11 168 449869 449711 MAG: Candidatus Campbellbacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.283_fly_man chromosome, complete genome blastn 420 143 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium
22161971 22161971 PRJNA509429_P_NODE_22898_length_274_cov_1.661088_g22070_i0 PRJNA509429 22898 274 1.661088 4.55138112 Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 1618633 Bacteria Bacteria 265 2.97e-66   NTclustered gi|837353685|gb|CP011215.1| 1618633 g22070 i0 86.831 5.05839416058394 243 24 87 7 37 274 7296 7535 MAG: Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 chromosome, complete genome blastn 1386 265 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium GW2011_OD1_34_28
24711334 24711334 PRJNA509429_P_NODE_51820_length_150_cov_1.304348_g50992_i0 PRJNA509429 51820 150 1.304348 1.956522 Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 1618633 Bacteria Bacteria 119 1.19e-22   NTclustered gi|837353685|gb|CP011215.1| 1618633 g50992 i0 83.465 35.4533333333333 127 21 85 0 24 150 7749 7875 MAG: Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 chromosome, complete genome blastn 5318 119 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium GW2011_OD1_34_28

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;