RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA509429" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA509429 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12589727 12589727 PRJNA509429_P_NODE_43230_length_171_cov_1.617647_g42402_i0 PRJNA509429 43230 171 1.617647 2.76617637 Bacteria 2 Bacteria Bacteria 283 4.67e-72   NTclustered gi|1769783243|gb|CP042461.1| 1862133 g42402 i0 96.491 21.0116959064327 171 6 100 0 1 171 1249993 1250163 Candidatus Gracilibacteria bacterium 28_42_T64 chromosome, complete genome blastn 3593 283 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium 28_42_T64
15787918 15787918 PRJNA509429_P_NODE_23133_length_272_cov_1.295359_g22305_i0 PRJNA509429 23133 272 1.295359 3.52337648 Candidatus Gracilibacteria bacterium 28_42_T64 1862133 Bacteria Bacteria 158 5.14e-34   NTclustered gi|1769783243|gb|CP042461.1| 1862133 g22305 i0 77.941 24.8602941176471 272 46 99 10 1 270 1251010 1250751 Candidatus Gracilibacteria bacterium 28_42_T64 chromosome, complete genome blastn 6762 158 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium 28_42_T64

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;