contig_metadata
10 rows where bioproject = "PRJNA509429", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1110767 | 1110767 | PRJNA509429_P_NODE_25841_length_251_cov_1.962963_g25013_i0 | PRJNA509429 | 25841 | 251 | 1.962963 | 4.92703713 | Pseudobdellovibrionaceae | 213483 | Bacteria | Bacteria | 340 | 4.33e-89 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g25013 | i0 | 91.532 | 245.454183266932 | 248 | 19 | 98 | 2 | 6 | 251 | 666592 | 666839 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 61609 | 342 | 0.994152046783626 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 1760497 | 1760497 | PRJNA509429_P_NODE_40822_length_178_cov_2.034965_g39994_i0 | PRJNA509429 | 40822 | 178 | 2.034965 | 3.6222377 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 252 | 1.38e-62 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g39994 | i0 | 92.571 | 201.730337078652 | 175 | 13 | 98 | 0 | 1 | 175 | 3447857 | 3448031 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 35908 | 252 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 2386267 | 2386267 | PRJNA509429_P_NODE_12582_length_403_cov_2.964674_g11762_i0 | PRJNA509429 | 12582 | 403 | 2.964674 | 11.94763622 | Bdellovibrio | 958 | Bacteria | Bacteria | 420 | 9.199999999999999e-113 | NTclustered | gi|2800924434|gb|CP168967.1| | 959 | g11762 | i0 | 85.714 | 230.133995037221 | 406 | 48 | 99 | 9 | 3 | 403 | 783673 | 784073 | Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome | blastn | 92744 | 420 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 5588997 | 5588997 | PRJNA509429_P_NODE_31325_length_217_cov_2.939560_g30497_i0 | PRJNA509429 | 31325 | 217 | 2.93956 | 6.3788452 | Bdellovibrio sp. NC01 | 2220073 | Bacteria | Bacteria | 368 | 1.68e-97 | NTclustered | gi|1700686220|gb|CP030034.1| | 2220073 | g30497 | i0 | 97.235 | 157.483870967742 | 217 | 6 | 100 | 0 | 1 | 217 | 861903 | 861687 | Bdellovibrio sp. NC01 chromosome, complete genome | blastn | 34174 | 368 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. NC01 | ||
| 5589021 | 5589021 | PRJNA509429_P_NODE_35925_length_196_cov_1.708075_g35097_i0 | PRJNA509429 | 35925 | 196 | 1.708075 | 3.347827 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 298 | 1.97e-76 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g35097 | i0 | 94.359 | 16.0408163265306 | 195 | 10 | 99 | 1 | 3 | 196 | 512477 | 512283 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 3144 | 298 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 6862985 | 6862985 | PRJNA509429_P_NODE_25906_length_250_cov_4.153488_g25078_i0 | PRJNA509429 | 25906 | 250 | 4.153488 | 10.38372 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 385 | 1.97e-102 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g25078 | i0 | 94.4 | 161.228 | 250 | 14 | 100 | 0 | 1 | 250 | 666226 | 666475 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 40307 | 385 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 8138339 | 8138339 | PRJNA509429_P_NODE_39167_length_184_cov_1.221477_g38339_i0 | PRJNA509429 | 39167 | 184 | 1.221477 | 2.24751768 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 246 | 6.71e-61 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g38339 | i0 | 96.053 | 67.7119565217391 | 152 | 5 | 83 | 1 | 33 | 184 | 1293918 | 1293768 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 12459 | 246 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 20237196 | 20237196 | PRJNA509429_P_NODE_17016_length_336_cov_1.325581_g16188_i0 | PRJNA509429 | 17016 | 336 | 1.325581 | 4.45395216 | Peredibacter | 263370 | Bacteria | Bacteria | 320 | 7.87e-83 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g16188 | i0 | 99.432 | 97.1636904761905 | 176 | 1 | 62 | 0 | 161 | 336 | 512068 | 511893 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 32647 | 320 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 21512714 | 21512714 | PRJNA509429_P_NODE_12717_length_401_cov_2.349727_g11897_i0 | PRJNA509429 | 12717 | 401 | 2.349727 | 9.42240527 | Bdellovibrio | 958 | Bacteria | Bacteria | 396 | 1.5399999999999995e-105 | NTclustered | gi|2800924434|gb|CP168967.1| | 959 | g11897 | i0 | 84.691 | 257.014962593516 | 405 | 52 | 100 | 8 | 1 | 401 | 784073 | 783675 | Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome | blastn | 103063 | 396 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 23437650 | 23437650 | PRJNA509429_P_NODE_27599_length_239_cov_2.250000_g26771_i0 | PRJNA509429 | 27599 | 239 | 2.25 | 5.3775 | Bdellovibrio sp. NC01 | 2220073 | Bacteria | Bacteria | 239 | 1.54e-58 | NTclustered | gi|1700686220|gb|CP030034.1| | 2220073 | g26771 | i0 | 86.147 | 59.7405857740586 | 231 | 21 | 94 | 8 | 2 | 225 | 861705 | 861479 | Bdellovibrio sp. NC01 chromosome, complete genome | blastn | 14278 | 239 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. NC01 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;