contig_metadata
7 rows where bioproject = "PRJNA509429", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1760512 | 1760512 | PRJNA509429_P_NODE_43602_length_170_cov_1.429630_g42774_i0 | PRJNA509429 | 43602 | 170 | 1.42963 | 2.430371 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 294 | 2.14e-75 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g42774 | i0 | 97.674 | 70.9529411764706 | 172 | 2 | 100 | 1 | 1 | 170 | 3943918 | 3944089 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 12062 | 294 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 10688966 | 10688966 | PRJNA509429_P_NODE_26169_length_248_cov_5.206573_g25341_i0 | PRJNA509429 | 26169 | 248 | 5.206573 | 12.91230104 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 403 | 5.38e-108 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g25341 | i0 | 95.968 | 207.004032258065 | 248 | 10 | 100 | 0 | 1 | 248 | 3944332 | 3944085 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 51337 | 403 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 10688998 | 10688998 | PRJNA509429_P_NODE_34569_length_202_cov_1.023952_g33741_i0 | PRJNA509429 | 34569 | 202 | 1.023952 | 2.06838304 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 158 | 3.6199999999999997e-34 | NTclustered | gi|1958031866|gb|CP064976.1| | 2026735 | g33741 | i0 | 81.407 | 98.9158415841584 | 199 | 31 | 99 | 5 | 4 | 202 | 2385077 | 2384885 | MAG: Deltaproteobacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.279_cln chromosome, complete genome | blastn | 19981 | 158 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 10689083 | 10689083 | PRJNA509429_P_NODE_50229_length_153_cov_2.033898_g49401_i0 | PRJNA509429 | 50229 | 153 | 2.033898 | 3.11186394 | Chondromyces crocatus | 52 | Bacteria | Bacteria | 158 | 2.58e-34 | NTclustered | gi|169977285|emb|AM946600.1| | 52 | g49401 | i0 | 85.161 | 68.9346405228758 | 155 | 21 | 100 | 2 | 1 | 153 | 420 | 266 | Chondromyces crocatus ajudazol biosynthesis gene cluster, strain Cmc5 | blastn | 10547 | 158 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Chondromyces | Chondromyces crocatus | |||
| 17062513 | 17062513 | PRJNA509429_P_NODE_2374_length_911_cov_17.006849_g1919_i0 | PRJNA509429 | 2374 | 911 | 17.006849 | 154.93239439 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 1351 | 0 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g1919 | i0 | 93.435 | 136.89462129528 | 914 | 55 | 100 | 4 | 1 | 911 | 7089615 | 7090526 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 124711 | 1351 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 19611210 | 19611210 | PRJNA509429_P_NODE_17396_length_331_cov_1.783784_g16568_i0 | PRJNA509429 | 17396 | 331 | 1.783784 | 5.90432504 | Melittangium boletus | 83453 | Bacteria | Bacteria | 313 | 1.3e-80 | NTclustered | gi|1243026503|gb|CP022163.1| | 1294270 | g16568 | i0 | 86.102 | 221.383685800604 | 295 | 35 | 89 | 6 | 39 | 331 | 3598447 | 3598737 | Melittangium boletus DSM 14713 chromosome, complete genome | blastn | 73278 | 313 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Melittangium | Melittangium boletus | ||
| 25337196 | 25337196 | PRJNA509429_P_NODE_42520_length_173_cov_1.739130_g41692_i0 | PRJNA509429 | 42520 | 173 | 1.73913 | 3.0086949 | Pendulispora | 3375062 | Bacteria | Bacteria | 182 | 1.78e-41 | NTclustered | gi|2698035964|gb|CP089984.1| | 2741071 | g41692 | i0 | 88.235 | 14.3121387283237 | 153 | 16 | 88 | 2 | 1 | 152 | 3589466 | 3589315 | Pendulispora albinea strain MSr11954 chromosome, complete genome | blastn | 2476 | 182 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora albinea |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;