RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA509429", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA509429 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24062672 24062672 PRJNA509429_P_NODE_21319_length_288_cov_1.596838_g20491_i0 PRJNA509429 21319 288 1.596838 4.59889344 Dictyoceratida 119428 Porifera other_Eukaryota 122 2e-23   NTclustered gi|2749500559|ref|XR_010696300.1| 196820 g20491 i0 92.941 29.1319444444444 85 5 29 1 1 84 3609 3525 PREDICTED: Dysidea avara large subunit ribosomal RNA (LOC136246210), rRNA blastn 8390 122 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
27677698 27677698 PRJNA509429_P_NODE_43684_length_170_cov_0.977778_g42856_i0 PRJNA509429 43684 170 0.977778 1.6622226 Amphimedon queenslandica 400682 Porifera other_Eukaryota 42.4 0.0194   NR XP_019859167.1 400682 g42856 i0 42.9 0.741176470588235 42 24 74.1 0 7 132 78 119 XP_019859167.1 PREDICTED: uncharacterized protein LOC109587365 [Amphimedon queenslandica] diamond 126 42.4 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;