RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA509429", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA509429 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1760455 1760455 PRJNA509429_P_NODE_34302_length_203_cov_1.607143_g33474_i0 PRJNA509429 34302 203 1.607143 3.26250029 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 237 4.55e-58   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g33474 i0 87.923 169.87684729064 207 18 100 5 1 203 5031255 5031458 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 34485 237 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
24711323 24711323 PRJNA509429_P_NODE_49860_length_154_cov_1.571429_g49032_i0 PRJNA509429 49860 154 1.571429 2.42000066 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 213 5.48e-51   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g49032 i0 91.558 299.441558441558 154 13 100 0 1 154 7831134 7831287 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 46114 213 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;