contig_metadata
48 rows where bioproject = "PRJNA509429" and tax_clade = "core chlorophytes"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2386286 | 2386286 | PRJNA509429_P_NODE_32462_length_211_cov_3.761364_g31634_i0 | PRJNA509429 | 32462 | 211 | 3.761364 | 7.93647804 | Selenastraceae | 35466 | Plants | Plants | 305 | 1.29e-78 | NTclustered | gi|2445342045|gb|OP765320.1| | 34112 | g31634 | i0 | 92.857 | 147.004739336493 | 210 | 15 | 99 | 0 | 1 | 210 | 57372 | 57163 | Chlorolobion braunii chloroplast, complete genome | blastn | 31018 | 305 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Chlorolobion | Chlorolobion braunii | |
| 3036325 | 3036325 | PRJNA509429_P_NODE_37303_length_191_cov_1.339744_g36475_i0 | PRJNA509429 | 37303 | 191 | 1.339744 | 2.55891104 | Microglena monadina | 47904 | Plants | Plants | 161 | 2.62e-35 | NTclustered | gi|952953029|gb|KT624798.1| | 47904 | g36475 | i0 | 95.098 | 0.534031413612565 | 102 | 5 | 53 | 0 | 90 | 191 | 7384 | 7283 | Microglena monadina clone contig-67 chloroplast, partial genome | blastn | 102 | 161 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Microglena | Microglena monadina | |
| 3036328 | 3036328 | PRJNA509429_P_NODE_37643_length_189_cov_3.688312_g36815_i0 | PRJNA509429 | 37643 | 189 | 3.688312 | 6.97090968 | Ankistrodesmus stipitatus | 3109 | Plants | Plants | 305 | 1.13e-78 | NTclustered | gi|17028159|gb|L42984.1|ANKCPRGOL | 3109 | g36815 | i0 | 96.237 | 172.137566137566 | 186 | 7 | 98 | 0 | 4 | 189 | 626 | 441 | Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene | blastn | 32534 | 305 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Ankistrodesmus | Ankistrodesmus stipitatus | |
| 3036342 | 3036342 | PRJNA509429_P_NODE_41143_length_177_cov_2.232394_g40315_i0 | PRJNA509429 | 41143 | 177 | 2.232394 | 3.95133738 | Corbierea radiosa | 51318 | Plants | Plants | 322 | 1.03e-83 | NTclustered | gi|18654306|gb|L42987.1|RTCCPRGOLB | 51318 | g40315 | i0 | 99.435 | 109.61581920904 | 177 | 1 | 100 | 0 | 1 | 177 | 722 | 898 | Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product | blastn | 19402 | 322 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Corbierea | Corbierea radiosa | |
| 3036350 | 3036350 | PRJNA509429_P_NODE_42683_length_172_cov_27.656934_g41855_i0 | PRJNA509429 | 42683 | 172 | 27.656934 | 47.56992648 | Chlamydomonas eustigma | 1157962 | Plants | Plants | 302 | 1.3e-77 | NTclustered | gi|1241780985|dbj|LC229075.1| | 1157962 | g41855 | i0 | 98.256 | 130.331395348837 | 172 | 3 | 100 | 0 | 1 | 172 | 1137 | 1308 | Chlamydomonas eustigma chloroplast gene for 16S ribosomal RNA, partial sequence, strain: NIES-2499 | blastn | 22417 | 302 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas eustigma | |
| 3662002 | 3662002 | PRJNA509429_P_NODE_10903_length_437_cov_8.865672_g10086_i0 | PRJNA509429 | 10903 | 437 | 8.865672 | 38.74298664 | Tetradesmus | 91192 | Plants | Plants | 791 | 0 | NTclustered | gi|108773031|ref|NC_008101.1| | 3088 | g10086 | i0 | 99.314 | 129.29290617849 | 437 | 3 | 100 | 0 | 1 | 437 | 80804 | 81240 | Acutodesmus obliquus strain UTEX 393 chloroplast, complete genome | blastn | 56501 | 791 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Tetradesmus | Tetradesmus obliquus | |
| 3662012 | 3662012 | PRJNA509429_P_NODE_19483_length_307_cov_1.977941_g18655_i0 | PRJNA509429 | 19483 | 307 | 1.977941 | 6.07227887 | Cladophora | 34125 | Plants | Plants | 562 | 1.07e-155 | NTclustered | gi|704000672|gb|KM676834.1| | 162068 | g18655 | i0 | 99.674 | 99.9837133550489 | 307 | 1 | 100 | 0 | 1 | 307 | 562 | 256 | Cladophora glomerata voucher ARS04755_00001 28S ribosomal RNA gene, partial sequence | blastn | 30695 | 562 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Cladophorales | Cladophoraceae | Cladophora | Cladophora glomerata | |
| 4312131 | 4312131 | PRJNA509429_P_NODE_31864_length_214_cov_3.754190_g31036_i0 | PRJNA509429 | 31864 | 214 | 3.75419 | 8.0339666 | Desmodesmus abundans | 77547 | Plants | Plants | 390 | 3.519999999999999e-104 | NTclustered | gi|2312613210|ref|NC_066651.1| | 77547 | g31036 | i0 | 99.533 | 143.018691588785 | 214 | 1 | 100 | 0 | 1 | 214 | 76967 | 76754 | Desmodesmus abundans strain FBCC-A1277 chloroplast, complete genome | blastn | 30606 | 390 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Desmodesmus | Desmodesmus abundans | |
| 5588985 | 5588985 | PRJNA509429_P_NODE_2845_length_837_cov_17.562344_g2336_i0 | PRJNA509429 | 2845 | 837 | 17.562344 | 146.99681928 | Tetradesmus obliquus | 3088 | Plants | Plants | 1306 | 0 | NTclustered | gi|1240946771|gb|KX756229.1| | 3088 | g2336 | i0 | 96.241 | 150.78733572282 | 798 | 28 | 95 | 2 | 36 | 831 | 80959 | 81756 | Tetradesmus obliquus chloroplast, complete genome | blastn | 126209 | 1306 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Tetradesmus | Tetradesmus obliquus | |
| 5588990 | 5588990 | PRJNA509429_P_NODE_29405_length_228_cov_2.502591_g28577_i0 | PRJNA509429 | 29405 | 228 | 2.502591 | 5.70590748 | Monoraphidium pusillum | 307512 | Plants | Plants | 344 | 2.99e-90 | NTclustered | gi|2720437858|gb|PP711304.1| | 307512 | g28577 | i0 | 93.913 | 100.789473684211 | 230 | 10 | 100 | 3 | 1 | 228 | 2784 | 3011 | Monoraphidium pusillum strain Ga024 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 22980 | 344 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Monoraphidium | Monoraphidium pusillum | |
| 6214246 | 6214246 | PRJNA509429_P_NODE_31185_length_218_cov_1.743169_g30357_i0 | PRJNA509429 | 31185 | 218 | 1.743169 | 3.80010842 | Selenastraceae | 35466 | Plants | Plants | 396 | 7.729999999999997e-106 | NTclustered | gi|2445342045|gb|OP765320.1| | 34112 | g30357 | i0 | 99.539 | 126.871559633028 | 217 | 1 | 99 | 0 | 1 | 217 | 53591 | 53375 | Chlorolobion braunii chloroplast, complete genome | blastn | 27658 | 396 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Chlorolobion | Chlorolobion braunii | |
| 6863010 | 6863010 | PRJNA509429_P_NODE_34046_length_204_cov_1.887574_g33218_i0 | PRJNA509429 | 34046 | 204 | 1.887574 | 3.85065096 | Monoraphidium dybowskii | 81818 | Plants | Plants | 377 | 2.59e-100 | NTclustered | gi|2727922309|gb|PP766946.1| | 81818 | g33218 | i0 | 100 | 99.2254901960784 | 204 | 0 | 100 | 0 | 1 | 204 | 2511 | 2714 | Monoraphidium dybowskii strain Ga012 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 20242 | 377 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Monoraphidium | Monoraphidium dybowskii | |
| 6863104 | 6863104 | PRJNA509429_S_NODE_166_length_196_cov_154373.742515_g165_i0 | PRJNA509429 | 166 | 196 | 154373.742515 | 302572.5353294 | Pleurastrum aquaticum | 3134064 | Plants | Plants | 250 | 5.6e-62 | NTclustered | gi|2707893997|gb|PP574979.1| | 3134064 | g165 | i0 | 95.513 | 83.8673469387755 | 156 | 7 | 80 | 0 | 8 | 163 | 410 | 565 | Pleurastrum aquaticum strain FACHB-3458 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 16438 | 250 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Pleurastraceae | Pleurastrum | Pleurastrum aquaticum | |
| 7488837 | 7488837 | PRJNA509429_P_NODE_24046_length_264_cov_18.262009_g23218_i0 | PRJNA509429 | 24046 | 264 | 18.262009 | 48.21170376 | Chlamydomonadaceae | 3051 | Plants | Plants | 396 | 9.669999999999996e-106 | NTclustered | gi|952953862|gb|KT625165.1| | 51693 | g23218 | i0 | 95.238 | 125.397727272727 | 252 | 8 | 95 | 3 | 3 | 254 | 6293 | 6046 | Lobochlamys culleus clone contig15 chloroplast, partial genome | blastn | 33105 | 396 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Lobochlamys | Lobochlamys culleus | |
| 8138310 | 8138310 | PRJNA509429_P_NODE_28087_length_236_cov_2.323383_g27259_i0 | PRJNA509429 | 28087 | 236 | 2.323383 | 5.48318388 | Chlamydomonas eustigma | 1157962 | Plants | Plants | 327 | 3.14e-85 | NTclustered | gi|1241780984|dbj|LC229074.1| | 1157962 | g27259 | i0 | 91.915 | 82.021186440678 | 235 | 18 | 99 | 1 | 3 | 236 | 2274 | 2508 | Chlamydomonas eustigma chloroplast gene for 23S ribosomal RNA, partial sequence, strain: NIES-2499 | blastn | 19357 | 327 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas eustigma | |
| 8763774 | 8763774 | PRJNA509429_P_NODE_32307_length_212_cov_2.740113_g31479_i0 | PRJNA509429 | 32307 | 212 | 2.740113 | 5.80903956 | Chaetophoropsis | 2505929 | Plants | Plants | 383 | 5.82e-102 | NTclustered | gi|1834977237|ref|NC_047431.1| | 2079440 | g31479 | i0 | 99.524 | 118.207547169811 | 210 | 1 | 99 | 0 | 3 | 212 | 100995 | 101204 | Chaetophoropsis polyrhiza chloroplast, complete genome | blastn | 25060 | 383 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chaetophorales | Chaetophoraceae | Chaetophoropsis | Chaetophoropsis polyrhiza | |
| 10039297 | 10039297 | PRJNA509429_P_NODE_22648_length_276_cov_3.066390_g21820_i0 | PRJNA509429 | 22648 | 276 | 3.06639 | 8.4632364 | Eukaryota | 2759 | Plants | Plants | 475 | 1.2699999999999996e-129 | NTclustered | gi|1714003650|gb|MN243923.1| | 3079 | g21820 | i0 | 97.826 | 99.286231884058 | 276 | 5 | 100 | 1 | 1 | 276 | 837 | 563 | Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence | blastn | 27403 | 475 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Chlorella | Chlorella sp. | |
| 10688965 | 10688965 | PRJNA509429_P_NODE_25629_length_252_cov_8.539171_g24801_i0 | PRJNA509429 | 25629 | 252 | 8.539171 | 21.51871092 | Pseudococcomyxa simplex | 464287 | Plants | Plants | 377 | 3.32e-100 | NTclustered | gi|375126619|gb|JQ278718.1| | 464287 | g24801 | i0 | 93.651 | 150.373015873016 | 252 | 16 | 100 | 0 | 1 | 252 | 1388 | 1137 | Pseudococcomyxa simplex strain SAG 216-15 23S ribosomal RNA gene, partial sequence; chloroplast | blastn | 37894 | 377 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Oocystaceae | Pseudococcomyxa | Pseudococcomyxa simplex | |
| 10689066 | 10689066 | PRJNA509429_P_NODE_46649_length_162_cov_0.944882_g45821_i0 | PRJNA509429 | 46649 | 162 | 0.944882 | 1.53070884 | Chaetophoropsis cf. attenuata FACHB-2291 | 2725790 | Plants | Plants | 283 | 4.39e-72 | NTclustered | gi|1831430457|gb|MN701986.1| | 2725790 | g45821 | i0 | 98.148 | 46.641975308642 | 162 | 3 | 100 | 0 | 1 | 162 | 9009 | 9170 | Chaetophoropsis cf. attenuata FACHB-2291 chloroplast, complete genome | blastn | 7556 | 283 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chaetophorales | Chaetophoraceae | Chaetophoropsis | Chaetophoropsis cf. attenuata FACHB-2291 | |
| 11313916 | 11313916 | PRJNA509429_P_NODE_19689_length_305_cov_1.211111_g18861_i0 | PRJNA509429 | 19689 | 305 | 1.211111 | 3.69388855 | Chlorophyceae | 3166 | Plants | Plants | 366 | 8.94e-97 | NTclustered | gi|1509778881|gb|MG778491.1| | 44656 | g18861 | i0 | 89.825 | 113.367213114754 | 285 | 29 | 93 | 0 | 21 | 305 | 23157 | 22873 | Protosiphon botryoides RNA polymerase beta subunit protein b (rpoBb), RNA polymerase beta subunit protein a (rpoBa), photosystem II protein VI (psbF), photosystem II protein L (psbL), cytochrome b6/f complex subunit V (petG), ribosomal protein S3 (rps3), RNA polymerase beta'' subunit (rpoC2), and D1 reaction center protein of photosystem II (psbA) genes, complete cds; and photosystem I P700 chlorophyll a apoprotein A1 (psaA) gene, exon 3 and partial cds; chloroplast | blastn | 34577 | 366 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Protosiphonaceae | Protosiphon | Protosiphon botryoides | |
| 11313917 | 11313917 | PRJNA509429_P_NODE_20669_length_294_cov_6.490347_g19841_i0 | PRJNA509429 | 20669 | 294 | 6.490347 | 19.08162018 | Tetradesmus | 91192 | Plants | Plants | 540 | 4.77e-149 | NTclustered | gi|1240946771|gb|KX756229.1| | 3088 | g19841 | i0 | 100 | 114.52380952381 | 292 | 0 | 99 | 0 | 1 | 292 | 78496 | 78787 | Tetradesmus obliquus chloroplast, complete genome | blastn | 33670 | 540 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Tetradesmus | Tetradesmus obliquus | |
| 11313920 | 11313920 | PRJNA509429_P_NODE_2429_length_903_cov_8.415899_g1965_i0 | PRJNA509429 | 2429 | 903 | 8.415899 | 75.99556797 | Mychonastes | 91354 | Plants | Plants | 1114 | 0 | NTclustered | gi|1008861523|ref|NC_029671.1| | 31300 | g1965 | i0 | 88.999 | 178.72203765227 | 909 | 89 | 100 | 10 | 1 | 903 | 930 | 1833 | Mychonastes homosphaera strain CAUP H6502 chloroplast, complete genome | blastn | 161386 | 1114 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Mychonastaceae | Mychonastes | Mychonastes homosphaera | |
| 11313947 | 11313947 | PRJNA509429_P_NODE_43929_length_169_cov_1.373134_g43101_i0 | PRJNA509429 | 43929 | 169 | 1.373134 | 2.32059646 | Hydrodictyaceae | 3103 | Plants | Plants | 313 | 5.859999999999999e-81 | NTclustered | gi|1197510150|ref|NC_034654.1| | 3105 | g43101 | i0 | 100 | 44.8047337278106 | 169 | 0 | 100 | 0 | 1 | 169 | 102098 | 102266 | Pediastrum duplex voucher EL0201CT chloroplast, complete genome | blastn | 7572 | 313 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Hydrodictyaceae | Pediastrum | Pediastrum duplex | |
| 11964049 | 11964049 | PRJNA509429_P_NODE_50870_length_152_cov_1.367521_g50042_i0 | PRJNA509429 | 50870 | 152 | 1.367521 | 2.07863192 | Tetradesmus obliquus | 3088 | Plants | Plants | 281 | 1.46e-71 | NTclustered | gi|7619792|emb|AJ277428.1| | 3088 | g50042 | i0 | 100 | 6.49342105263158 | 152 | 0 | 100 | 0 | 1 | 152 | 2995 | 3146 | Scenedesmus obliquus mitochondrial tRNA-Ser, tRNA-Asp, 16S rRNA, 23S rRNA genes, strain KS3-2 | blastn | 987 | 281 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Tetradesmus | Tetradesmus obliquus | |
| 11964055 | 11964055 | PRJNA509429_P_NODE_51670_length_150_cov_1.808696_g50842_i0 | PRJNA509429 | 51670 | 150 | 1.808696 | 2.713044 | Chlamydomonas allensworthii | 51691 | Plants | Plants | 172 | 8.99e-39 | NTclustered | gi|283766138|gb|GQ921929.1| | 51691 | g50842 | i0 | 87.333 | 2.96 | 150 | 19 | 100 | 0 | 1 | 150 | 430 | 579 | Chlamydomonas allensworthii 23S large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast | blastn | 444 | 172 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas allensworthii | |
| 12589710 | 12589710 | PRJNA509429_P_NODE_3110_length_803_cov_9.113281_g2577_i0 | PRJNA509429 | 3110 | 803 | 9.113281 | 73.17964643 | Chlamydomonadales | 3042 | Plants | Plants | 1003 | 0 | NTclustered | gi|953272927|gb|KT625417.1| | 35704 | g2577 | i0 | 89.356 | 134.753424657534 | 808 | 73 | 99 | 12 | 2 | 803 | 11775 | 12575 | Chlamydomonas applanata culture-collection SAG:11-9 chloroplast, partial genome | blastn | 108207 | 1003 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas applanata | |
| 12589717 | 12589717 | PRJNA509429_P_NODE_36510_length_194_cov_0.955975_g35682_i0 | PRJNA509429 | 36510 | 194 | 0.955975 | 1.8545915 | Chlorophyta | 3041 | Plants | Plants | 276 | 9.13e-70 | NTclustered | gi|1011057710|ref|NC_029735.1| | 52688 | g35682 | i0 | 92.268 | 111.69587628866 | 194 | 15 | 100 | 0 | 1 | 194 | 55603 | 55410 | Ankyra judayi strain SAG 17.84 chloroplast, complete genome | blastn | 21669 | 276 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Sphaeropleaceae | Ankyra | Ankyra judayi | |
| 12589753 | 12589753 | PRJNA509429_P_NODE_930_length_1343_cov_28.519113_g685_i0 | PRJNA509429 | 930 | 1343 | 28.519113 | 383.01168759 | Tetradesmus | 91192 | Plants | Plants | 1487 | 0 | NTclustered | gi|2692951646|ref|NC_086753.1| | 113531 | g685 | i0 | 95.238 | 131.707371556217 | 945 | 35 | 70 | 8 | 1 | 938 | 84638 | 83697 | Tetradesmus distendus strain FBCC-A1020 chloroplast, complete genome | blastn | 176883 | 1487 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Tetradesmus | Tetradesmus distendus | |
| 13239146 | 13239146 | PRJNA509429_P_NODE_31111_length_218_cov_2.956284_g30283_i0 | PRJNA509429 | 31111 | 218 | 2.956284 | 6.44469912 | Desmodesmus abundans | 77547 | Plants | Plants | 403 | 4.62e-108 | NTclustered | gi|2278077277|gb|OP103755.1| | 77547 | g30283 | i0 | 100 | 99.8715596330275 | 218 | 0 | 100 | 0 | 1 | 218 | 2960 | 2743 | Desmodesmus abundans strain FBCC-A1277 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 21772 | 403 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Desmodesmus | Desmodesmus abundans | |
| 13239152 | 13239152 | PRJNA509429_P_NODE_33911_length_205_cov_1.247059_g33083_i0 | PRJNA509429 | 33911 | 205 | 1.247059 | 2.55647095 | Hafniomonas laevis | 436124 | Plants | Plants | 115 | 2.25e-21 | NTclustered | gi|959124445|ref|NC_028583.1| | 436124 | g33083 | i0 | 78.01 | 1.86341463414634 | 191 | 36 | 92 | 6 | 3 | 190 | 130725 | 130912 | Hafniomonas laevis culture-collection NIES:257 chloroplast, complete genome | blastn | 382 | 115 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Dunaliellaceae | Hafniomonas | Hafniomonas laevis | |
| 13864536 | 13864536 | PRJNA509429_P_NODE_2451_length_900_cov_12.110983_g1985_i0 | PRJNA509429 | 2451 | 900 | 12.110983 | 108.998847 | Chlorophyceae | 3166 | Plants | Plants | 1397 | 0 | NTclustered | gi|459314754|ref|NC_020438.1| | 33097 | g1985 | i0 | 94.673 | 157.421111111111 | 901 | 46 | 100 | 2 | 1 | 900 | 51130 | 52029 | Gonium pectorale chloroplast, complete genome | blastn | 141679 | 1399 | 0.998570407433881 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Volvocaceae | Gonium | Gonium pectorale | |
| 14514143 | 14514143 | PRJNA509429_P_NODE_28652_length_232_cov_5.573604_g27824_i0 | PRJNA509429 | 28652 | 232 | 5.573604 | 12.93076128 | Tetradesmus obliquus | 3088 | Plants | Plants | 429 | 8.2e-116 | NTclustered | gi|2632235295|gb|OR922677.1| | 3088 | g27824 | i0 | 100 | 99.5043103448276 | 232 | 0 | 100 | 0 | 1 | 232 | 2781 | 3012 | Tetradesmus obliquus strain AGSB0030 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 23085 | 429 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Tetradesmus | Tetradesmus obliquus | |
| 14514217 | 14514217 | PRJNA509429_P_NODE_46912_length_161_cov_1.373016_g46084_i0 | PRJNA509429 | 46912 | 161 | 1.373016 | 2.21055576 | Trebouxia lynnae | 1825957 | Plants | Plants | 298 | 1.56e-76 | NTclustered | gi|1016111943|gb|KU716051.1| | 1825957 | g46084 | i0 | 100 | 24 | 161 | 0 | 100 | 0 | 1 | 161 | 6848 | 6688 | Trebouxia lynnae 26S-18S intergenic spacer region, partial sequence; 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence; and 26S-18S rRNA intergenic spacer region, partial sequence | blastn | 3864 | 298 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | Trebouxia lynnae | |
| 14514233 | 14514233 | PRJNA509429_P_NODE_51132_length_151_cov_2.267241_g50304_i0 | PRJNA509429 | 51132 | 151 | 2.267241 | 3.42353391 | Tetradesmus obliquus | 3088 | Plants | Plants | 268 | 1.12e-67 | NTclustered | gi|1240946771|gb|KX756229.1| | 3088 | g50304 | i0 | 98.675 | 120.980132450331 | 151 | 2 | 100 | 0 | 1 | 151 | 66842 | 66692 | Tetradesmus obliquus chloroplast, complete genome | blastn | 18268 | 268 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Tetradesmus | Tetradesmus obliquus | |
| 15138798 | 15138798 | PRJNA509429_P_NODE_24712_length_259_cov_7.825893_g23884_i0 | PRJNA509429 | 24712 | 259 | 7.825893 | 20.26906287 | Tetradesmus | 91192 | Plants | Plants | 427 | 3.349999999999999e-115 | NTclustered | gi|1240946771|gb|KX756229.1| | 3088 | g23884 | i0 | 97.222 | 146.513513513514 | 252 | 7 | 97 | 0 | 8 | 259 | 80551 | 80802 | Tetradesmus obliquus chloroplast, complete genome | blastn | 37947 | 427 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Tetradesmus | Tetradesmus obliquus | |
| 16413471 | 16413471 | PRJNA509429_P_NODE_40673_length_179_cov_1.076389_g39845_i0 | PRJNA509429 | 40673 | 179 | 1.076389 | 1.92673631 | Chlorella | 3071 | Plants | Plants | 145 | 2.43e-30 | NTclustered | gi|671743011|ref|NC_024626.1| | 3076 | g39845 | i0 | 87.805 | 79.5195530726257 | 123 | 15 | 69 | 0 | 47 | 169 | 9455 | 9333 | Chlorella sorokiniana isolate 1230 mitochondrion, complete genome | blastn | 14234 | 145 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Chlorella | Chlorella sorokiniana | |
| 17062497 | 17062497 | PRJNA509429_P_NODE_14774_length_367_cov_4.560241_g13949_i0 | PRJNA509429 | 14774 | 367 | 4.560241 | 16.73608447 | Chlorophyceae sp. UMPCCC 1216 | 1563470 | Plants | Plants | 656 | 0 | NTclustered | gi|699262614|gb|KM218903.1| | 1563470 | g13949 | i0 | 98.91 | 140.828337874659 | 367 | 4 | 100 | 0 | 1 | 367 | 540 | 174 | Chlorophyceae sp. UMPCCC 1216 16S ribosomal RNA gene, partial sequence; plastid | blastn | 51684 | 656 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlorophyceae sp. UMPCCC 1216 | ||||
| 17062528 | 17062528 | PRJNA509429_P_NODE_2814_length_840_cov_19.858385_g2310_i0 | PRJNA509429 | 2814 | 840 | 19.858385 | 166.810434 | Tetradesmus obliquus | 3088 | Plants | Plants | 1291 | 0 | NTclustered | gi|1240946771|gb|KX756229.1| | 3088 | g2310 | i0 | 95.88 | 153.895238095238 | 801 | 28 | 95 | 4 | 36 | 834 | 80959 | 81756 | Tetradesmus obliquus chloroplast, complete genome | blastn | 129272 | 1291 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Tetradesmus | Tetradesmus obliquus | |
| 19611299 | 19611299 | PRJNA509429_P_NODE_42996_length_172_cov_1.058394_g42168_i0 | PRJNA509429 | 42996 | 172 | 1.058394 | 1.82043768 | Chlamydomonas peterfii | 28462 | Plants | Plants | 244 | 2.22e-60 | NTclustered | gi|952953385|gb|KT624966.1| | 28462 | g42168 | i0 | 92.486 | 117.93023255814 | 173 | 10 | 100 | 3 | 1 | 172 | 1314 | 1144 | Chlamydomonas peterfii clone contig00044 chloroplast, partial genome | blastn | 20284 | 244 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas peterfii | |
| 20237208 | 20237208 | PRJNA509429_P_NODE_26596_length_245_cov_6.866667_g25768_i0 | PRJNA509429 | 26596 | 245 | 6.866667 | 16.82333415 | Desmodesmus | 91202 | Plants | Plants | 387 | 5.34e-103 | NTclustered | gi|2575200469|gb|OR533320.1| | 375941 | g25768 | i0 | 95.102 | 66.8122448979592 | 245 | 12 | 100 | 0 | 1 | 245 | 5683 | 5439 | Desmodesmus armatus culture FBCC:A0245 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence | blastn | 16369 | 387 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Desmodesmus | Desmodesmus armatus | |
| 20887270 | 20887270 | PRJNA509429_P_NODE_23997_length_265_cov_2.334783_g23169_i0 | PRJNA509429 | 23997 | 265 | 2.334783 | 6.18717495 | Chlamydomonas sp. UWO 241 | 1653778 | Plants | Plants | 311 | 3.62e-80 | NTclustered | gi|1423312327|gb|MH590838.1| | 1653778 | g23169 | i0 | 90.083 | 144.018867924528 | 242 | 21 | 91 | 3 | 23 | 263 | 69536 | 69775 | Chlamydomonas sp. UWO 241 plastid, complete genome | blastn | 38165 | 311 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas sp. UWO 241 | |
| 21512759 | 21512759 | PRJNA509429_P_NODE_47337_length_160_cov_1.312000_g46509_i0 | PRJNA509429 | 47337 | 160 | 1.312 | 2.0992 | Pithophoraceae | 926346 | Plants | Plants | 202 | 1.2499999999999998e-47 | NTclustered | gi|1169296929|gb|KY364699.1| | 162062 | g46509 | i0 | 89.375 | 12.225 | 160 | 17 | 100 | 0 | 1 | 160 | 4399 | 4240 | Aegagropila linnaei 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 1956 | 202 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Cladophorales | Pithophoraceae | Aegagropila | Aegagropila linnaei | |
| 22787789 | 22787789 | PRJNA509429_P_NODE_14898_length_365_cov_8.081818_g14073_i0 | PRJNA509429 | 14898 | 365 | 8.081818 | 29.4986357 | Tetradesmus | 91192 | Plants | Plants | 675 | 0 | NTclustered | gi|2576955160|gb|OR551481.1| | 113531 | g14073 | i0 | 100 | 76.4383561643836 | 365 | 0 | 100 | 0 | 1 | 365 | 5734 | 5370 | Tetradesmus distendus culture FBCC:A1020 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 27900 | 675 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Tetradesmus | Tetradesmus distendus | |
| 22787800 | 22787800 | PRJNA509429_P_NODE_22278_length_279_cov_7.135246_g21450_i0 | PRJNA509429 | 22278 | 279 | 7.135246 | 19.90733634 | Eukaryota | 2759 | Plants | Plants | 425 | 1.31e-114 | NTclustered | gi|1212783794|gb|MF083691.1| | 3055 | g21450 | i0 | 94.265 | 163.412186379928 | 279 | 15 | 99 | 1 | 2 | 279 | 42198 | 41920 | Chlamydomonas reinhardtii strain CC-1051 M18 (ac9) mt+ chloroplast, complete genome | blastn | 45592 | 427 | 0.995316159250585 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 22787815 | 22787815 | PRJNA509429_P_NODE_32458_length_211_cov_3.897727_g31630_i0 | PRJNA509429 | 32458 | 211 | 3.897727 | 8.22420397 | Selenastraceae | 35466 | Plants | Plants | 350 | 5.869999999999999e-92 | NTclustered | gi|2445342045|gb|OP765320.1| | 34112 | g31630 | i0 | 96.667 | 134.658767772512 | 210 | 7 | 99 | 0 | 1 | 210 | 57372 | 57163 | Chlorolobion braunii chloroplast, complete genome | blastn | 28413 | 350 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Chlorolobion | Chlorolobion braunii | |
| 23437756 | 23437756 | PRJNA509429_P_NODE_9519_length_472_cov_5.185355_g8707_i0 | PRJNA509429 | 9519 | 472 | 5.185355 | 24.4748756 | Chlamydomonas eustigma | 1157962 | Plants | Plants | 717 | 0 | NTclustered | gi|1241780984|dbj|LC229074.1| | 1157962 | g8707 | i0 | 94.08 | 149.377118644068 | 473 | 26 | 100 | 2 | 1 | 472 | 2021 | 1550 | Chlamydomonas eustigma chloroplast gene for 23S ribosomal RNA, partial sequence, strain: NIES-2499 | blastn | 70506 | 717 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas eustigma | |
| 24062673 | 24062673 | PRJNA509429_P_NODE_22299_length_279_cov_4.245902_g21471_i0 | PRJNA509429 | 22299 | 279 | 4.245902 | 11.84606658 | Scenedesmaceae | 3086 | Plants | Plants | 390 | 4.7899999999999996e-104 | NTclustered | gi|523583561|gb|KC145458.1| | 3088 | g21471 | i0 | 92.115 | 99.4551971326165 | 279 | 19 | 100 | 1 | 1 | 279 | 1370 | 1645 | Acutodesmus obliquus strain UTEX 393 28S ribosomal RNA gene, partial sequence | blastn | 27748 | 390 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Tetradesmus | Tetradesmus obliquus | |
| 25337199 | 25337199 | PRJNA509429_P_NODE_43740_length_169_cov_4.052239_g42912_i0 | PRJNA509429 | 43740 | 169 | 4.052239 | 6.84828391 | Trebouxia | 13786 | Plants | Plants | 302 | 1.27e-77 | NTclustered | gi|21631|emb|Z21553.1| | 13787 | g42912 | i0 | 98.817 | 99.9940828402367 | 169 | 2 | 100 | 0 | 1 | 169 | 703 | 871 | T.asymmetrica gene encoding 18S ribosomal RNA | blastn | 16899 | 302 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | Trebouxia asymmetrica |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;