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contig_metadata

6 rows where bioproject = "PRJNA509429", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA509429 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
485199 485199 PRJNA509429_P_NODE_34021_length_204_cov_2.195266_g33193_i0 PRJNA509429 34021 204 2.195266 4.47834264 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 340 3.39e-89   NTclustered gi|238617602|gb|FJ973377.1| 188950 g33193 i0 96.602 11.2892156862745 206 5 100 2 1 204 592 387 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 2303 340 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
6863065 6863065 PRJNA509429_P_NODE_46086_length_163_cov_1.648438_g45258_i0 PRJNA509429 46086 163 1.648438 2.68695394 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 100 4.78e-17   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g45258 i0 81.967 0.748466257668712 122 18 74 4 41 160 3889 4008 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 122 100 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
18962405 18962405 PRJNA509429_P_NODE_47895_length_159_cov_0.798387_g47067_i0 PRJNA509429 47895 159 0.798387 1.26943533 Fisculla 2004640 SAR_Eukaryotes SAR_Eukaryotes 220 3.4099999999999998e-53   NTclustered gi|48727784|gb|AY620274.1| 175275 g47067 i0 100 67.0314465408805 119 0 75 0 1 119 236 118 Uncultured cercozoan clone 4-2.3 small subunit ribosomal RNA gene, partial sequence blastn 10658 220 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
19611272 19611272 PRJNA509429_P_NODE_37196_length_191_cov_2.083333_g36368_i0 PRJNA509429 37196 191 2.083333 3.97916603 uncultured Cercozoa 175275 SAR_Eukaryotes SAR_Eukaryotes 287 4.14e-73   NTclustered gi|1270185585|gb|MG266086.1| 175275 g36368 i0 93.717 98.9633507853403 191 12 100 0 1 191 403 593 Uncultured Cercozoa clone MossITSLSU68 large subunit ribosomal RNA gene, partial sequence blastn 18902 287 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
19611340 19611340 PRJNA509429_P_NODE_50596_length_152_cov_3.495726_g49768_i0 PRJNA509429 50596 152 3.495726 5.31350352 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 187 3.27e-43   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g49768 i0 88.889 83.0855263157895 153 16 100 1 1 152 261 109 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 12629 187 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
22161983 22161983 PRJNA509429_P_NODE_27638_length_239_cov_1.426471_g26810_i0 PRJNA509429 27638 239 1.426471 3.40926569 Bodomorpha prolixa 983146 SAR_Eukaryotes SAR_Eukaryotes 442 1.0899999999999994e-119   NTclustered gi|323320593|gb|HQ918170.1| 983146 g26810 i0 100 99.7112970711297 239 0 100 0 1 239 932 694 Bodomorpha sp. B118 18S ribosomal RNA gene, partial sequence blastn 23831 442 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha prolixa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;