RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA509429", tax_clade = "Opisthokonta" and tax_phylum = "Zoopagomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA509429 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15138819 15138819 PRJNA509429_P_NODE_40292_length_180_cov_1.648276_g39464_i0 PRJNA509429 40292 180 1.648276 2.9668968 Conidiobolus 34487 Fungi Fungi 56.5 0.001   NTclustered gi|44936836|gb|AY546691.1| 34488 g39464 i0 100 0.988888888888889 30 0 17 0 96 125 1657 1686 Conidiobolus coronatus isolate AFTOL-ID 137 28S large subunit ribosomal RNA gene, partial sequence blastn 178 56.5 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Conidiobolus Conidiobolus coronatus
22162007 22162007 PRJNA509429_P_NODE_34278_length_203_cov_1.833333_g33450_i0 PRJNA509429 34278 203 1.833333 3.72166599 Dispira parvispora 1520584 Fungi Fungi 117 6.190000000000001e-22   NTclustered gi|666440459|gb|KF848918.1| 1520584 g33450 i0 80.795 1.07881773399015 151 27 74 2 3 152 1005 856 Dispira parvispora 18S ribosomal RNA gene, partial sequence blastn 219 117 1 Eukaryota Opisthokonta Fungi Zoopagomycota Dimargaritomycetes Dimargaritales Dimargaritaceae Dispira Dispira parvispora
29603074 29603074 PRJNA509429_P_NODE_42590_length_173_cov_1.304348_g41762_i0 PRJNA509429 42590 173 1.304348 2.25652204 Coemansia javaensis 2761396 Fungi Fungi 42 0.0278   NR KAJ2782999.1 2761396 g41762 i0 45 0.69364161849711 40 22 69.4 0 14 133 173 212 KAJ2782999.1 hypothetical protein H4R18_001962 [Coemansia javaensis] diamond 120 42 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia javaensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;