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contig_metadata

16 rows where bioproject = "PRJNA509429", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 16 ✖

tax_clade 1

  • Discoba · 16 ✖

bioproject 1

  • PRJNA509429 · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3036392 3036392 PRJNA509429_P_NODE_5183_length_635_cov_3.786667_g4509_i0 PRJNA509429 5183 635 3.786667 24.04533545 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 1018 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g4509 i0 95.597 86.2944881889764 636 27 100 1 1 635 955 320 Naegleria gruberi mitochondrion, complete genome blastn 54797 1018 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
4312216 4312216 PRJNA509429_P_NODE_6704_length_563_cov_19.964015_g5952_i0 PRJNA509429 6704 563 19.964015 112.39740445 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 977 0   NTclustered gi|32479131|gb|AY321362.1| 51634 g5952 i0 98.046 98.4245115452931 563 9 100 1 1 563 640 1200 Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence blastn 55413 977 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
6214231 6214231 PRJNA509429_P_NODE_18965_length_312_cov_34.046931_g18137_i0 PRJNA509429 18965 312 34.046931 106.22642472 Naegleria 5761 Heterolobosea other_Eukaryota 560 3.92e-155   NTclustered gi|2618963742|gb|OR769034.1| 5762 g18137 i0 99.038 10.1346153846154 312 3 100 0 1 312 5792 5481 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 3162 560 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9413341 9413341 PRJNA509429_P_NODE_25508_length_253_cov_4.935780_g24680_i0 PRJNA509429 25508 253 4.93578 12.4875234 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 424 4.22e-114   NTclustered gi|11466174|ref|NC_002573.1| 5762 g24680 i0 96.838 47.0553359683794 253 8 100 0 1 253 1737 1485 Naegleria gruberi mitochondrion, complete genome blastn 11905 424 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9413474 9413474 PRJNA509429_P_NODE_7888_length_519_cov_4.126033_g7099_i0 PRJNA509429 7888 519 4.126033 21.41411127 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 898 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g7099 i0 97.881 38.626204238921 519 11 100 0 1 519 1479 961 Naegleria gruberi mitochondrion, complete genome blastn 20047 898 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11313937 11313937 PRJNA509429_P_NODE_3869_length_726_cov_95.062229_g1266_i1 PRJNA509429 3869 726 95.062229 690.15178254 Naegleria 5761 Heterolobosea other_Eukaryota 1171 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g1266 i1 97.791 31.3195592286501 679 15 94 0 1 679 3023 2345 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 22738 1171 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11313969 11313969 PRJNA509429_P_NODE_8009_length_515_cov_22.841667_g7218_i0 PRJNA509429 8009 515 22.841667 117.63458505 Naegleria 5761 Heterolobosea other_Eukaryota 952 0   NTclustered gi|2351569|gb|U80057.1|NAU80057 5764 g7218 i0 100 99.5669902912621 515 0 100 0 1 515 696 1210 Naegleria andersoni 18S ribosomal RNA gene, partial sequence blastn 51277 952 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria andersoni
12589706 12589706 PRJNA509429_P_NODE_27210_length_241_cov_4.699029_g26382_i0 PRJNA509429 27210 241 4.699029 11.32465989 Naegleria 5761 Heterolobosea other_Eukaryota 429 8.58e-116   NTclustered gi|2651357780|gb|PP174296.1| 36333 g26382 i0 98.755 24.8008298755187 241 3 100 0 1 241 4060 3820 Naegleria clarki isolate P2881 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 5977 429 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
12589754 12589754 PRJNA509429_P_NODE_9610_length_470_cov_3.416092_g8798_i0 PRJNA509429 9610 470 3.416092 16.0556324 Naegleria 5761 Heterolobosea other_Eukaryota 763 0   NTclustered gi|38606345|gb|AY376153.1| 5762 g8798 i0 95.966 64.7914893617021 471 18 100 1 1 470 869 399 Naegleria gruberi isolate 7860 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 30452 763 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
15787915 15787915 PRJNA509429_P_NODE_22373_length_279_cov_1.639344_g21545_i0 PRJNA509429 22373 279 1.639344 4.57376976 Parafumarolamoeba stagnalis 2872509 Heterolobosea other_Eukaryota 496 9.88e-136   NTclustered gi|2086087549|gb|MZ919148.1| 2872509 g21545 i0 98.917 8.86021505376344 277 3 99 0 1 277 721 997 Parafumarolamoeba stagnalis small subunit ribosomal RNA gene, partial sequence blastn 2472 496 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Parafumarolamoeba Parafumarolamoeba stagnalis
17062489 17062489 PRJNA509429_P_NODE_10794_length_440_cov_2.708642_g9977_i0 PRJNA509429 10794 440 2.708642 11.9180248 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 736 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g9977 i0 96.818 18.9477272727273 440 14 100 0 1 440 48275 48714 Naegleria gruberi mitochondrion, complete genome blastn 8337 736 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22161957 22161957 PRJNA509429_P_NODE_1618_length_1076_cov_69.621518_g1266_i0 PRJNA509429 1618 1076 69.621518 749.12753368 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 1644 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g1266 i0 95.45 35.8289962825279 1033 43 96 3 48 1076 2345 3377 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 38552 1644 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22161992 22161992 PRJNA509429_P_NODE_2958_length_822_cov_19.321474_g2440_i0 PRJNA509429 2958 822 19.321474 158.82251628 Naegleria pringsheimi 234921 Heterolobosea other_Eukaryota 1275 0   NTclustered gi|2515557648|gb|OR045415.1| 234921 g2440 i0 94.775 24.4221411192214 823 35 100 7 1 822 5143 5958 Naegleria pringsheimi strain Singh(s) rDNA-containing extrachromosomal element genomic sequence; 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 20075 1275 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria pringsheimi
23437724 23437724 PRJNA509429_P_NODE_47599_length_159_cov_2.298387_g46771_i0 PRJNA509429 47599 159 2.298387 3.65443533 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 156 9.75e-34   NTclustered gi|2031943399|emb|OD958269.1| 5763 g46771 i0 84.906 34.0691823899371 159 19 97 5 1 155 158 1 Naegleria fowleri Karachi_NF001 strain blastn 5417 156 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
24711216 24711216 PRJNA509429_P_NODE_28880_length_231_cov_2.913265_g28052_i0 PRJNA509429 28880 231 2.913265 6.72964215 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 292 1.12e-74   NTclustered gi|2719226838|gb|PP695237.1| 51637 g28052 i0 89.407 9.17748917748918 236 20 100 2 1 231 2787 3022 Naegleria lovaniensis strain TS rDNA-containing extrachromosomal element genomic sequence blastn 2120 292 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
27772343 27772343 PRJNA509429_P_NODE_45384_length_165_cov_1.230769_g44556_i0 PRJNA509429 45384 165 1.230769 2.03076885 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 63.9 1.48e-11   NR XP_044541690.1 51637 g44556 i0 68.1 0.854545454545454 47 15 85.5 0 143 3 1 47 XP_044541690.1 uncharacterized protein C9374_013830 [Naegleria lovaniensis] diamond 141 63.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;