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contig_metadata

18 rows where bioproject = "PRJNA509429", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 18 ✖

tax_clade 1

  • Discoba · 18 ✖

bioproject 1

  • PRJNA509429 · 18 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
485198 485198 PRJNA509429_P_NODE_33521_length_206_cov_4.163743_g32693_i0 PRJNA509429 33521 206 4.163743 8.57731058 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 52.8 0.018   NTclustered gi|1031970221|gb|CP015655.1| 85057 g32693 i0 100 0.135922330097087 28 0 14 0 156 183 50510 50537 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI5, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
1110791 1110791 PRJNA509429_P_NODE_4341_length_690_cov_9.909924_g3714_i0 PRJNA509429 4341 690 9.909924 68.3784756 Leishmania 5658 Euglenozoa other_Eukaryota 797 0   NTclustered gi|2593250474|emb|OY748421.1| 5660 g3714 i0 87.553 123.613043478261 707 65 100 18 1 690 989688 990388 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 85293 797 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
3662019 3662019 PRJNA509429_P_NODE_26423_length_247_cov_1.410377_g25595_i0 PRJNA509429 26423 247 1.410377 3.48363119 Trachelomonas 96503 Euglenozoa other_Eukaryota 279 9.41e-71   NTclustered gi|944273901|gb|KT305008.1| 1685805 g25595 i0 87.2 101.234817813765 250 26 100 6 1 247 399 645 Trachelomonas sp. Chosan090509C large subunit ribosomal RNA gene, partial sequence blastn 25005 279 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Trachelomonas Trachelomonas sp. Chosan090509C
3662047 3662047 PRJNA509429_P_NODE_4343_length_690_cov_6.989313_g3714_i1 PRJNA509429 4343 690 6.989313 48.2262597 Leishmania 5658 Euglenozoa other_Eukaryota 869 0   NTclustered gi|2593250474|emb|OY748421.1| 5660 g3714 i1 89.392 123.411594202899 707 52 100 18 1 690 989688 990388 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 85154 869 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
5588978 5588978 PRJNA509429_P_NODE_25845_length_251_cov_1.851852_g25017_i0 PRJNA509429 25845 251 1.851852 4.64814852 Trachelomonas hispida 96504 Euglenozoa other_Eukaryota 399 7.049999999999999e-107   NTclustered gi|27461798|gb|AY130818.1| 96504 g25017 i0 94.717 25.8286852589641 265 0 100 1 1 251 2 266 Trachelomonas hispida voucher University of Texas Culture Collection (UTEX) 1325 large subunit ribosomal RNA gene, partial sequence blastn 6483 399 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Trachelomonas Trachelomonas hispida
6862963 6862963 PRJNA509429_P_NODE_18286_length_320_cov_3.185965_g17458_i0 PRJNA509429 18286 320 3.185965 10.195088 Neobodo sp. 2815825 Euglenozoa other_Eukaryota 302 2.7e-77   NTclustered gi|1996609214|gb|MW694333.1| 2815825 g17458 i0 90.213 18.703125 235 18 72 4 4 234 906 673 Neobodo sp. isolate G08 small subunit ribosomal RNA gene, partial sequence blastn 5985 302 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo sp.
9413324 9413324 PRJNA509429_P_NODE_17228_length_333_cov_2.348993_g16400_i0 PRJNA509429 17228 333 2.348993 7.82214669 Monomorphina inconspicuus 344917 Euglenozoa other_Eukaryota 315 3.62e-81   NTclustered gi|209362332|gb|DQ140111.2| 344917 g16400 i0 87.868 81.5345345345345 272 27 81 5 65 333 218 486 Monomorphina inconspicuus strain ACOI 1295 large subunit ribosomal RNA gene, partial sequence blastn 27151 315 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Monomorphina Monomorphina inconspicuus
9413348 9413348 PRJNA509429_P_NODE_27588_length_239_cov_2.372549_g26760_i0 PRJNA509429 27588 239 2.372549 5.67039211 Phacus pseudonordstedtii 158831 Euglenozoa other_Eukaryota 436 5.0799999999999985e-118   NTclustered gi|371456074|gb|DQ140112.2| 158831 g26760 i0 99.582 35.3765690376569 239 1 100 0 1 239 420 182 Phacus pseudonordstedtii large subunit ribosomal RNA gene, partial sequence blastn 8455 436 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Phacaceae Phacus Phacus pseudonordstedtii
10689032 10689032 PRJNA509429_P_NODE_4069_length_711_cov_3.702663_g3451_i0 PRJNA509429 4069 711 3.702663 26.32593393 Entosiphon sp. 1921133 Euglenozoa other_Eukaryota 800 0   NTclustered gi|1547024950|gb|MK213406.1| 1921133 g3451 i0 87.252 6.33192686357243 706 84 99 6 11 711 800 1504 Entosiphon sp. strain ESC small subunit ribosomal RNA, partial sequence blastn 4502 800 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp.
11313919 11313919 PRJNA509429_P_NODE_24109_length_264_cov_2.475983_g23281_i0 PRJNA509429 24109 264 2.475983 6.53659512 Entosiphon 101492 Euglenozoa other_Eukaryota 165 2.97e-36   NTclustered gi|41400272|gb|AY425008.1| 259048 g23281 i0 95.192 2.9469696969697 104 5 39 0 1 104 103 206 Entosiphon sp. TCS-2003 18S ribosomal RNA gene, partial sequence blastn 778 165 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp. TCS 2003
11963963 11963963 PRJNA509429_P_NODE_32910_length_209_cov_2.821839_g32082_i0 PRJNA509429 32910 209 2.821839 5.89764351 Euglenaria clavata 344910 Euglenozoa other_Eukaryota 257 3.6200000000000005e-64   NTclustered gi|209362326|gb|DQ140104.2| 344910 g32082 i0 89.524 47.4545454545455 210 13 99 6 1 208 3055 2853 Euglenaria clavata strain SAG 1224-32 large subunit ribosomal RNA gene, partial sequence blastn 9918 257 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglenaria Euglenaria clavata
16413477 16413477 PRJNA509429_P_NODE_4373_length_688_cov_6.173047_g3714_i2 PRJNA509429 4373 688 6.173047 42.47056336 Leishmania 5658 Euglenozoa other_Eukaryota 804 0   NTclustered gi|2593250474|emb|OY748421.1| 5660 g3714 i2 87.836 124.138081395349 707 59 100 22 1 688 990386 989688 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 85407 804 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
16413488 16413488 PRJNA509429_P_NODE_50193_length_153_cov_2.288136_g49365_i0 PRJNA509429 50193 153 2.288136 3.50084808 Trachelomonas 96503 Euglenozoa other_Eukaryota 283 4.0799999999999995e-72   NTclustered gi|27461798|gb|AY130818.1| 96504 g49365 i0 100 98.4183006535948 153 0 100 0 1 153 428 276 Trachelomonas hispida voucher University of Texas Culture Collection (UTEX) 1325 large subunit ribosomal RNA gene, partial sequence blastn 15058 283 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Trachelomonas Trachelomonas hispida
17688648 17688648 PRJNA509429_P_NODE_44114_length_168_cov_2.924812_g43286_i0 PRJNA509429 44114 168 2.924812 4.91368416 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 84.2 5e-12   NTclustered gi|2414483|emb|Y00055.1| 5656 g43286 i0 96.154 29.797619047619 52 1 31 1 1 52 7444 7394 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 5006 84.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
18336970 18336970 PRJNA509429_P_NODE_49415_length_155_cov_1.658333_g48587_i0 PRJNA509429 49415 155 1.658333 2.57041615 Petalomonas cantuscygni 56452 Euglenozoa other_Eukaryota 204 3.32e-48   NTclustered gi|31323484|gb|AF386635.1| 56452 g48587 i0 90.446 7.89032258064516 157 11 99 4 2 155 1050 895 Petalomonas cantuscygni CCAP 1259/1 small subunit ribosomal RNA gene, partial sequence blastn 1223 204 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
21512741 21512741 PRJNA509429_P_NODE_36797_length_192_cov_6.006369_g35969_i0 PRJNA509429 36797 192 6.006369 11.53222848 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 195 2.6e-45   NTclustered gi|1658007|gb|U73613.1|LBU73613 5660 g35969 i0 91.489 108.510416666667 141 12 73 0 1 141 19 159 Leishmania braziliensis 24S alpha ribosomal RNA gene, partial sequence blastn 20834 195 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
24062708 24062708 PRJNA509429_P_NODE_47179_length_160_cov_2.552000_g46351_i0 PRJNA509429 47179 160 2.552 4.0832 Leishmania 5658 Euglenozoa other_Eukaryota 235 1.23e-57   NTclustered gi|440222388|gb|JX030056.1| 5659 g46351 i0 93.125 88.69375 160 11 100 0 1 160 169 10 Leishmania amazonensis isolate LaPH8.rRNA.32 28S ribosomal RNA (LSU-delta M2), partial sequence blastn 14191 235 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
24711230 24711230 PRJNA509429_P_NODE_3180_length_795_cov_8.590789_g2640_i0 PRJNA509429 3180 795 8.590789 68.29677255 Neobodo designis 312471 Euglenozoa other_Eukaryota 1236 0   NTclustered gi|59891943|gb|AY753603.1| 312471 g2640 i0 94.875 86.7383647798742 800 25 100 14 1 795 632 1420 Neobodo designis isolate TeToto1 18S ribosomal RNA gene, partial sequence blastn 68957 1236 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;