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contig_metadata

34 rows where bioproject = "PRJNA509429" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 34 ✖

bioproject 1

  • PRJNA509429 · 34 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
485198 485198 PRJNA509429_P_NODE_33521_length_206_cov_4.163743_g32693_i0 PRJNA509429 33521 206 4.163743 8.57731058 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 52.8 0.018   NTclustered gi|1031970221|gb|CP015655.1| 85057 g32693 i0 100 0.135922330097087 28 0 14 0 156 183 50510 50537 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI5, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
1110791 1110791 PRJNA509429_P_NODE_4341_length_690_cov_9.909924_g3714_i0 PRJNA509429 4341 690 9.909924 68.3784756 Leishmania 5658 Euglenozoa other_Eukaryota 797 0   NTclustered gi|2593250474|emb|OY748421.1| 5660 g3714 i0 87.553 123.613043478261 707 65 100 18 1 690 989688 990388 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 85293 797 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
3036392 3036392 PRJNA509429_P_NODE_5183_length_635_cov_3.786667_g4509_i0 PRJNA509429 5183 635 3.786667 24.04533545 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 1018 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g4509 i0 95.597 86.2944881889764 636 27 100 1 1 635 955 320 Naegleria gruberi mitochondrion, complete genome blastn 54797 1018 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
3662019 3662019 PRJNA509429_P_NODE_26423_length_247_cov_1.410377_g25595_i0 PRJNA509429 26423 247 1.410377 3.48363119 Trachelomonas 96503 Euglenozoa other_Eukaryota 279 9.41e-71   NTclustered gi|944273901|gb|KT305008.1| 1685805 g25595 i0 87.2 101.234817813765 250 26 100 6 1 247 399 645 Trachelomonas sp. Chosan090509C large subunit ribosomal RNA gene, partial sequence blastn 25005 279 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Trachelomonas Trachelomonas sp. Chosan090509C
3662047 3662047 PRJNA509429_P_NODE_4343_length_690_cov_6.989313_g3714_i1 PRJNA509429 4343 690 6.989313 48.2262597 Leishmania 5658 Euglenozoa other_Eukaryota 869 0   NTclustered gi|2593250474|emb|OY748421.1| 5660 g3714 i1 89.392 123.411594202899 707 52 100 18 1 690 989688 990388 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 85154 869 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
4312216 4312216 PRJNA509429_P_NODE_6704_length_563_cov_19.964015_g5952_i0 PRJNA509429 6704 563 19.964015 112.39740445 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 977 0   NTclustered gi|32479131|gb|AY321362.1| 51634 g5952 i0 98.046 98.4245115452931 563 9 100 1 1 563 640 1200 Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence blastn 55413 977 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
5588978 5588978 PRJNA509429_P_NODE_25845_length_251_cov_1.851852_g25017_i0 PRJNA509429 25845 251 1.851852 4.64814852 Trachelomonas hispida 96504 Euglenozoa other_Eukaryota 399 7.049999999999999e-107   NTclustered gi|27461798|gb|AY130818.1| 96504 g25017 i0 94.717 25.8286852589641 265 0 100 1 1 251 2 266 Trachelomonas hispida voucher University of Texas Culture Collection (UTEX) 1325 large subunit ribosomal RNA gene, partial sequence blastn 6483 399 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Trachelomonas Trachelomonas hispida
6214231 6214231 PRJNA509429_P_NODE_18965_length_312_cov_34.046931_g18137_i0 PRJNA509429 18965 312 34.046931 106.22642472 Naegleria 5761 Heterolobosea other_Eukaryota 560 3.92e-155   NTclustered gi|2618963742|gb|OR769034.1| 5762 g18137 i0 99.038 10.1346153846154 312 3 100 0 1 312 5792 5481 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 3162 560 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6862963 6862963 PRJNA509429_P_NODE_18286_length_320_cov_3.185965_g17458_i0 PRJNA509429 18286 320 3.185965 10.195088 Neobodo sp. 2815825 Euglenozoa other_Eukaryota 302 2.7e-77   NTclustered gi|1996609214|gb|MW694333.1| 2815825 g17458 i0 90.213 18.703125 235 18 72 4 4 234 906 673 Neobodo sp. isolate G08 small subunit ribosomal RNA gene, partial sequence blastn 5985 302 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo sp.
9413324 9413324 PRJNA509429_P_NODE_17228_length_333_cov_2.348993_g16400_i0 PRJNA509429 17228 333 2.348993 7.82214669 Monomorphina inconspicuus 344917 Euglenozoa other_Eukaryota 315 3.62e-81   NTclustered gi|209362332|gb|DQ140111.2| 344917 g16400 i0 87.868 81.5345345345345 272 27 81 5 65 333 218 486 Monomorphina inconspicuus strain ACOI 1295 large subunit ribosomal RNA gene, partial sequence blastn 27151 315 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Monomorphina Monomorphina inconspicuus
9413341 9413341 PRJNA509429_P_NODE_25508_length_253_cov_4.935780_g24680_i0 PRJNA509429 25508 253 4.93578 12.4875234 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 424 4.22e-114   NTclustered gi|11466174|ref|NC_002573.1| 5762 g24680 i0 96.838 47.0553359683794 253 8 100 0 1 253 1737 1485 Naegleria gruberi mitochondrion, complete genome blastn 11905 424 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9413348 9413348 PRJNA509429_P_NODE_27588_length_239_cov_2.372549_g26760_i0 PRJNA509429 27588 239 2.372549 5.67039211 Phacus pseudonordstedtii 158831 Euglenozoa other_Eukaryota 436 5.0799999999999985e-118   NTclustered gi|371456074|gb|DQ140112.2| 158831 g26760 i0 99.582 35.3765690376569 239 1 100 0 1 239 420 182 Phacus pseudonordstedtii large subunit ribosomal RNA gene, partial sequence blastn 8455 436 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Phacaceae Phacus Phacus pseudonordstedtii
9413474 9413474 PRJNA509429_P_NODE_7888_length_519_cov_4.126033_g7099_i0 PRJNA509429 7888 519 4.126033 21.41411127 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 898 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g7099 i0 97.881 38.626204238921 519 11 100 0 1 519 1479 961 Naegleria gruberi mitochondrion, complete genome blastn 20047 898 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10689032 10689032 PRJNA509429_P_NODE_4069_length_711_cov_3.702663_g3451_i0 PRJNA509429 4069 711 3.702663 26.32593393 Entosiphon sp. 1921133 Euglenozoa other_Eukaryota 800 0   NTclustered gi|1547024950|gb|MK213406.1| 1921133 g3451 i0 87.252 6.33192686357243 706 84 99 6 11 711 800 1504 Entosiphon sp. strain ESC small subunit ribosomal RNA, partial sequence blastn 4502 800 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp.
11313919 11313919 PRJNA509429_P_NODE_24109_length_264_cov_2.475983_g23281_i0 PRJNA509429 24109 264 2.475983 6.53659512 Entosiphon 101492 Euglenozoa other_Eukaryota 165 2.97e-36   NTclustered gi|41400272|gb|AY425008.1| 259048 g23281 i0 95.192 2.9469696969697 104 5 39 0 1 104 103 206 Entosiphon sp. TCS-2003 18S ribosomal RNA gene, partial sequence blastn 778 165 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp. TCS 2003
11313937 11313937 PRJNA509429_P_NODE_3869_length_726_cov_95.062229_g1266_i1 PRJNA509429 3869 726 95.062229 690.15178254 Naegleria 5761 Heterolobosea other_Eukaryota 1171 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g1266 i1 97.791 31.3195592286501 679 15 94 0 1 679 3023 2345 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 22738 1171 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11313969 11313969 PRJNA509429_P_NODE_8009_length_515_cov_22.841667_g7218_i0 PRJNA509429 8009 515 22.841667 117.63458505 Naegleria 5761 Heterolobosea other_Eukaryota 952 0   NTclustered gi|2351569|gb|U80057.1|NAU80057 5764 g7218 i0 100 99.5669902912621 515 0 100 0 1 515 696 1210 Naegleria andersoni 18S ribosomal RNA gene, partial sequence blastn 51277 952 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria andersoni
11963963 11963963 PRJNA509429_P_NODE_32910_length_209_cov_2.821839_g32082_i0 PRJNA509429 32910 209 2.821839 5.89764351 Euglenaria clavata 344910 Euglenozoa other_Eukaryota 257 3.6200000000000005e-64   NTclustered gi|209362326|gb|DQ140104.2| 344910 g32082 i0 89.524 47.4545454545455 210 13 99 6 1 208 3055 2853 Euglenaria clavata strain SAG 1224-32 large subunit ribosomal RNA gene, partial sequence blastn 9918 257 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglenaria Euglenaria clavata
12589706 12589706 PRJNA509429_P_NODE_27210_length_241_cov_4.699029_g26382_i0 PRJNA509429 27210 241 4.699029 11.32465989 Naegleria 5761 Heterolobosea other_Eukaryota 429 8.58e-116   NTclustered gi|2651357780|gb|PP174296.1| 36333 g26382 i0 98.755 24.8008298755187 241 3 100 0 1 241 4060 3820 Naegleria clarki isolate P2881 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 5977 429 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
12589754 12589754 PRJNA509429_P_NODE_9610_length_470_cov_3.416092_g8798_i0 PRJNA509429 9610 470 3.416092 16.0556324 Naegleria 5761 Heterolobosea other_Eukaryota 763 0   NTclustered gi|38606345|gb|AY376153.1| 5762 g8798 i0 95.966 64.7914893617021 471 18 100 1 1 470 869 399 Naegleria gruberi isolate 7860 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 30452 763 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
15787915 15787915 PRJNA509429_P_NODE_22373_length_279_cov_1.639344_g21545_i0 PRJNA509429 22373 279 1.639344 4.57376976 Parafumarolamoeba stagnalis 2872509 Heterolobosea other_Eukaryota 496 9.88e-136   NTclustered gi|2086087549|gb|MZ919148.1| 2872509 g21545 i0 98.917 8.86021505376344 277 3 99 0 1 277 721 997 Parafumarolamoeba stagnalis small subunit ribosomal RNA gene, partial sequence blastn 2472 496 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Parafumarolamoeba Parafumarolamoeba stagnalis
16413477 16413477 PRJNA509429_P_NODE_4373_length_688_cov_6.173047_g3714_i2 PRJNA509429 4373 688 6.173047 42.47056336 Leishmania 5658 Euglenozoa other_Eukaryota 804 0   NTclustered gi|2593250474|emb|OY748421.1| 5660 g3714 i2 87.836 124.138081395349 707 59 100 22 1 688 990386 989688 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 85407 804 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
16413488 16413488 PRJNA509429_P_NODE_50193_length_153_cov_2.288136_g49365_i0 PRJNA509429 50193 153 2.288136 3.50084808 Trachelomonas 96503 Euglenozoa other_Eukaryota 283 4.0799999999999995e-72   NTclustered gi|27461798|gb|AY130818.1| 96504 g49365 i0 100 98.4183006535948 153 0 100 0 1 153 428 276 Trachelomonas hispida voucher University of Texas Culture Collection (UTEX) 1325 large subunit ribosomal RNA gene, partial sequence blastn 15058 283 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Trachelomonas Trachelomonas hispida
17062489 17062489 PRJNA509429_P_NODE_10794_length_440_cov_2.708642_g9977_i0 PRJNA509429 10794 440 2.708642 11.9180248 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 736 0   NTclustered gi|11466174|ref|NC_002573.1| 5762 g9977 i0 96.818 18.9477272727273 440 14 100 0 1 440 48275 48714 Naegleria gruberi mitochondrion, complete genome blastn 8337 736 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
17688648 17688648 PRJNA509429_P_NODE_44114_length_168_cov_2.924812_g43286_i0 PRJNA509429 44114 168 2.924812 4.91368416 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 84.2 5e-12   NTclustered gi|2414483|emb|Y00055.1| 5656 g43286 i0 96.154 29.797619047619 52 1 31 1 1 52 7444 7394 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 5006 84.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
18336970 18336970 PRJNA509429_P_NODE_49415_length_155_cov_1.658333_g48587_i0 PRJNA509429 49415 155 1.658333 2.57041615 Petalomonas cantuscygni 56452 Euglenozoa other_Eukaryota 204 3.32e-48   NTclustered gi|31323484|gb|AF386635.1| 56452 g48587 i0 90.446 7.89032258064516 157 11 99 4 2 155 1050 895 Petalomonas cantuscygni CCAP 1259/1 small subunit ribosomal RNA gene, partial sequence blastn 1223 204 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
21512741 21512741 PRJNA509429_P_NODE_36797_length_192_cov_6.006369_g35969_i0 PRJNA509429 36797 192 6.006369 11.53222848 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 195 2.6e-45   NTclustered gi|1658007|gb|U73613.1|LBU73613 5660 g35969 i0 91.489 108.510416666667 141 12 73 0 1 141 19 159 Leishmania braziliensis 24S alpha ribosomal RNA gene, partial sequence blastn 20834 195 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
22161957 22161957 PRJNA509429_P_NODE_1618_length_1076_cov_69.621518_g1266_i0 PRJNA509429 1618 1076 69.621518 749.12753368 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 1644 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g1266 i0 95.45 35.8289962825279 1033 43 96 3 48 1076 2345 3377 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 38552 1644 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22161992 22161992 PRJNA509429_P_NODE_2958_length_822_cov_19.321474_g2440_i0 PRJNA509429 2958 822 19.321474 158.82251628 Naegleria pringsheimi 234921 Heterolobosea other_Eukaryota 1275 0   NTclustered gi|2515557648|gb|OR045415.1| 234921 g2440 i0 94.775 24.4221411192214 823 35 100 7 1 822 5143 5958 Naegleria pringsheimi strain Singh(s) rDNA-containing extrachromosomal element genomic sequence; 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 20075 1275 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria pringsheimi
23437724 23437724 PRJNA509429_P_NODE_47599_length_159_cov_2.298387_g46771_i0 PRJNA509429 47599 159 2.298387 3.65443533 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 156 9.75e-34   NTclustered gi|2031943399|emb|OD958269.1| 5763 g46771 i0 84.906 34.0691823899371 159 19 97 5 1 155 158 1 Naegleria fowleri Karachi_NF001 strain blastn 5417 156 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
24062708 24062708 PRJNA509429_P_NODE_47179_length_160_cov_2.552000_g46351_i0 PRJNA509429 47179 160 2.552 4.0832 Leishmania 5658 Euglenozoa other_Eukaryota 235 1.23e-57   NTclustered gi|440222388|gb|JX030056.1| 5659 g46351 i0 93.125 88.69375 160 11 100 0 1 160 169 10 Leishmania amazonensis isolate LaPH8.rRNA.32 28S ribosomal RNA (LSU-delta M2), partial sequence blastn 14191 235 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
24711216 24711216 PRJNA509429_P_NODE_28880_length_231_cov_2.913265_g28052_i0 PRJNA509429 28880 231 2.913265 6.72964215 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 292 1.12e-74   NTclustered gi|2719226838|gb|PP695237.1| 51637 g28052 i0 89.407 9.17748917748918 236 20 100 2 1 231 2787 3022 Naegleria lovaniensis strain TS rDNA-containing extrachromosomal element genomic sequence blastn 2120 292 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
24711230 24711230 PRJNA509429_P_NODE_3180_length_795_cov_8.590789_g2640_i0 PRJNA509429 3180 795 8.590789 68.29677255 Neobodo designis 312471 Euglenozoa other_Eukaryota 1236 0   NTclustered gi|59891943|gb|AY753603.1| 312471 g2640 i0 94.875 86.7383647798742 800 25 100 14 1 795 632 1420 Neobodo designis isolate TeToto1 18S ribosomal RNA gene, partial sequence blastn 68957 1236 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
27772343 27772343 PRJNA509429_P_NODE_45384_length_165_cov_1.230769_g44556_i0 PRJNA509429 45384 165 1.230769 2.03076885 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 63.9 1.48e-11   NR XP_044541690.1 51637 g44556 i0 68.1 0.854545454545454 47 15 85.5 0 143 3 1 47 XP_044541690.1 uncharacterized protein C9374_013830 [Naegleria lovaniensis] diamond 141 63.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;