contig_metadata
2 rows where bioproject = "PRJNA509429", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Peregrinibacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9413372 | 9413372 | PRJNA509429_P_NODE_34288_length_203_cov_1.702381_g33460_i0 | PRJNA509429 | 34288 | 203 | 1.702381 | 3.45583343 | Candidatus Peribacteria bacterium | 2053688 | Bacteria | Bacteria | 158 | 3.6399999999999997e-34 | NTclustered | gi|2258833497|gb|CP060226.1| | 2053688 | g33460 | i0 | 82.051 | 92.8029556650246 | 195 | 26 | 94 | 8 | 4 | 194 | 813272 | 813461 | MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome | blastn | 18839 | 158 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Peregrinibacteriota | Candidatus Peribacteria | Candidatus Peribacteria bacterium | |||||
| 27393375 | 27393375 | PRJNA509429_P_NODE_45263_length_165_cov_2.138462_g44435_i0 | PRJNA509429 | 45263 | 165 | 2.138462 | 3.5284623 | Candidatus Peregrinibacteria bacterium Greene1 | 2030811 | Bacteria | Bacteria | 41.2 | 0.00845 | NR | TSC99758.1 | 2017153 | g44435 | i0 | 48.9 | 0.818181818181818 | 45 | 23 | 81.8 | 0 | 162 | 28 | 23 | 67 | TSC99758.1 MAG: hypothetical protein Greene101449_535 [Candidatus Peregrinibacteria bacterium Greene1014_49] | diamond | 135 | 41.2 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Peregrinibacteriota | Candidatus Peregrinibacteria bacterium Greene1014_49 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;