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contig_metadata

8 rows where bioproject = "PRJNA509429", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 8 ✖

tax_clade 1

  • Amoebozoa · 8 ✖

bioproject 1

  • PRJNA509429 · 8 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
485223 485223 PRJNA509429_P_NODE_39201_length_184_cov_1.067114_g38373_i0 PRJNA509429 39201 184 1.067114 1.96348976 Mastigamoeba balamuthi 108607 Evosea other_Eukaryota 99 1.99e-16   NTclustered gi|463171|gb|L23799.1|PMHRRSS 108607 g38373 i0 90.667 0.407608695652174 75 6 40 1 32 105 1174 1100 Phreatamoeba balamuthi ribosomal RNA small subunit gene blastn 75 99 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Mastigamoebidae Mastigamoeba Mastigamoeba balamuthi
3036333 3036333 PRJNA509429_P_NODE_38883_length_185_cov_1.066667_g38055_i0 PRJNA509429 38883 185 1.066667 1.97333395 Physarum polycephalum 5791 Evosea other_Eukaryota 285 1.43e-72   NTclustered gi|414783|emb|X75592.1| 5791 g38055 i0 96.512 75.1135135135135 172 6 93 0 13 184 151 322 P. polycephalum M3C mitochondrial SSU gene for 17S ribosomal RNA(pSSU) blastn 13896 285 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
3036360 3036360 PRJNA509429_P_NODE_44303_length_168_cov_1.203008_g43475_i0 PRJNA509429 44303 168 1.203008 2.02105344 Badhamia foliicola 647245 Evosea other_Eukaryota 311 2.11e-80   NTclustered gi|1864351373|gb|MT704208.1| 647245 g43475 i0 100 100.660714285714 168 0 100 0 1 168 395 228 Badhamia foliicola voucher MM21366 small subunit ribosomal RNA gene, partial sequence blastn 16911 311 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Badhamia Badhamia foliicola
5589048 5589048 PRJNA509429_P_NODE_42305_length_174_cov_1.151079_g41477_i0 PRJNA509429 42305 174 1.151079 2.00287746 Physarum polycephalum 5791 Evosea other_Eukaryota 292 7.92e-75   NTclustered gi|3221|emb|V01159.1| 5791 g41477 i0 98.204 16.867816091954 167 3 96 0 8 174 1624 1790 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 2935 292 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
6863046 6863046 PRJNA509429_P_NODE_42286_length_174_cov_1.151079_g41458_i0 PRJNA509429 42286 174 1.151079 2.00287746 Mastigamoeba balamuthi 108607 Evosea other_Eukaryota 91.6 3.1e-14   NTclustered gi|19911164|dbj|AB066364.1| 108607 g41458 i0 77.273 1.01149425287356 176 26 100 13 1 174 2125 1962 Mastigamoeba balamuthi gene for LSU rRNA, partial sequence, clone:MbR2 blastn 176 91.6 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Mastigamoebidae Mastigamoeba Mastigamoeba balamuthi
14514232 14514232 PRJNA509429_P_NODE_50372_length_153_cov_1.355932_g49544_i0 PRJNA509429 50372 153 1.355932 2.07457596 Mastigamoeba balamuthi 108607 Evosea other_Eukaryota 99 1.59e-16   NTclustered gi|19911164|dbj|AB066364.1| 108607 g49544 i0 95.161 1.2156862745098 62 3 41 0 92 153 1010 949 Mastigamoeba balamuthi gene for LSU rRNA, partial sequence, clone:MbR2 blastn 186 99 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Mastigamoebidae Mastigamoeba Mastigamoeba balamuthi
15787998 15787998 PRJNA509429_P_NODE_46293_length_162_cov_6.535433_g45465_i0 PRJNA509429 46293 162 6.535433 10.58740146 Phalansterium solitarium 136499 Evosea other_Eukaryota 58.4 2.9e-4   NTclustered gi|300078500|gb|GU001162.1| 136499 g45465 i0 100 0.191358024691358 31 0 19 0 22 52 4802 4772 Phalansterium solitarium 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 31 58.4 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium solitarium
18336863 18336863 PRJNA509429_P_NODE_18555_length_317_cov_1.460993_g17727_i0 PRJNA509429 18555 317 1.460993 4.63134781 Physarum polycephalum 5791 Evosea other_Eukaryota 436 7.019999999999999e-118   NTclustered gi|3221|emb|V01159.1| 5791 g17727 i0 91.562 25.0504731861199 320 21 100 6 1 317 1265 949 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 7941 436 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;