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contig_metadata

17 rows where bioproject = "PRJNA509429" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 17 ✖

bioproject 1

  • PRJNA509429 · 17 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
485223 485223 PRJNA509429_P_NODE_39201_length_184_cov_1.067114_g38373_i0 PRJNA509429 39201 184 1.067114 1.96348976 Mastigamoeba balamuthi 108607 Evosea other_Eukaryota 99 1.99e-16   NTclustered gi|463171|gb|L23799.1|PMHRRSS 108607 g38373 i0 90.667 0.407608695652174 75 6 40 1 32 105 1174 1100 Phreatamoeba balamuthi ribosomal RNA small subunit gene blastn 75 99 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Mastigamoebidae Mastigamoeba Mastigamoeba balamuthi
485242 485242 PRJNA509429_P_NODE_42241_length_174_cov_1.460432_g41413_i0 PRJNA509429 42241 174 1.460432 2.54115168 Ripella platypodia 2047821 Discosea other_Eukaryota 289 1.02e-73   NTclustered gi|1269228378|gb|MF683503.1| 2047821 g41413 i0 96.552 101.413793103448 174 6 100 0 1 174 1505 1332 Ripella platypodia clone 26.10.41 18S ribosomal RNA gene, partial sequence blastn 17646 289 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
3036333 3036333 PRJNA509429_P_NODE_38883_length_185_cov_1.066667_g38055_i0 PRJNA509429 38883 185 1.066667 1.97333395 Physarum polycephalum 5791 Evosea other_Eukaryota 285 1.43e-72   NTclustered gi|414783|emb|X75592.1| 5791 g38055 i0 96.512 75.1135135135135 172 6 93 0 13 184 151 322 P. polycephalum M3C mitochondrial SSU gene for 17S ribosomal RNA(pSSU) blastn 13896 285 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
3036360 3036360 PRJNA509429_P_NODE_44303_length_168_cov_1.203008_g43475_i0 PRJNA509429 44303 168 1.203008 2.02105344 Badhamia foliicola 647245 Evosea other_Eukaryota 311 2.11e-80   NTclustered gi|1864351373|gb|MT704208.1| 647245 g43475 i0 100 100.660714285714 168 0 100 0 1 168 395 228 Badhamia foliicola voucher MM21366 small subunit ribosomal RNA gene, partial sequence blastn 16911 311 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Badhamia Badhamia foliicola
3662055 3662055 PRJNA509429_P_NODE_48563_length_157_cov_1.434426_g47735_i0 PRJNA509429 48563 157 1.434426 2.25204882 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 217 4.339999999999999e-52   NTclustered gi|441475832|emb|FN562422.4| 1089205 g47735 i0 93.706 51.6815286624204 143 8 91 1 15 157 641 782 Amoebozoa sp. SZA19 18S rRNA gene, isolate SZA19 blastn 8114 219 0.990867579908676 Eukaryota Amoebozoa             Amoebozoa sp. SZA19
4312162 4312162 PRJNA509429_P_NODE_39364_length_183_cov_1.804054_g38536_i0 PRJNA509429 39364 183 1.804054 3.30141882 Ripella tribonemae 2047823 Discosea other_Eukaryota 291 3.03e-74   NTclustered gi|1269228452|gb|MF683577.1| 2047823 g38536 i0 98.204 85.1147540983606 167 2 91 1 17 183 687 852 Ripella tribonemae clone 70.1.12 18S ribosomal RNA gene, partial sequence blastn 15576 291 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae
5589048 5589048 PRJNA509429_P_NODE_42305_length_174_cov_1.151079_g41477_i0 PRJNA509429 42305 174 1.151079 2.00287746 Physarum polycephalum 5791 Evosea other_Eukaryota 292 7.92e-75   NTclustered gi|3221|emb|V01159.1| 5791 g41477 i0 98.204 16.867816091954 167 3 96 0 8 174 1624 1790 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 2935 292 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
6863046 6863046 PRJNA509429_P_NODE_42286_length_174_cov_1.151079_g41458_i0 PRJNA509429 42286 174 1.151079 2.00287746 Mastigamoeba balamuthi 108607 Evosea other_Eukaryota 91.6 3.1e-14   NTclustered gi|19911164|dbj|AB066364.1| 108607 g41458 i0 77.273 1.01149425287356 176 26 100 13 1 174 2125 1962 Mastigamoeba balamuthi gene for LSU rRNA, partial sequence, clone:MbR2 blastn 176 91.6 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Mastigamoebidae Mastigamoeba Mastigamoeba balamuthi
8138265 8138265 PRJNA509429_P_NODE_17147_length_334_cov_2.575251_g16319_i0 PRJNA509429 17147 334 2.575251 8.60133834 Vannella mustalahtiana 2841357 Discosea other_Eukaryota 460 4.409999999999999e-125   NTclustered gi|2047416624|gb|MZ329079.1| 2841357 g16319 i0 92.615 94.5568862275449 325 17 96 7 15 334 636 958 Vannella sp. AKud-2021a clone NGD4255 small subunit ribosomal RNA gene, partial sequence blastn 31582 460 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella mustalahtiana
10039296 10039296 PRJNA509429_P_NODE_22568_length_277_cov_1.971074_g21740_i0 PRJNA509429 22568 277 1.971074 5.45987498 Hartmannellidae 5776 Tubulinea other_Eukaryota 507 4.53e-139   NTclustered gi|2347458558|gb|OP894078.1| 136464 g21740 i0 99.639 96.9494584837545 277 1 100 0 1 277 640 364 Saccamoeba limax isolate SLU_22 small subunit ribosomal RNA gene, partial sequence blastn 26855 507 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Saccamoeba Saccamoeba limax
10039332 10039332 PRJNA509429_P_NODE_47628_length_159_cov_2.080645_g46800_i0 PRJNA509429 47628 159 2.080645 3.30822555 Vannella 95228 Discosea other_Eukaryota 102 1.29e-17   NTclustered gi|300078499|gb|GU001161.1| 197531 g46800 i0 95.312 33.1698113207547 64 3 40 0 96 159 1247 1184 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 5274 102 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
14514103 14514103 PRJNA509429_P_NODE_14532_length_371_cov_2.000000_g13707_i0 PRJNA509429 14532 371 2 7.42 Vannella septentrionalis 197531 Discosea other_Eukaryota 459 1.7799999999999998e-124   NTclustered gi|300078499|gb|GU001161.1| 197531 g13707 i0 89.182 55.6846361185984 379 26 100 9 1 371 2834 2463 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20659 459 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
14514232 14514232 PRJNA509429_P_NODE_50372_length_153_cov_1.355932_g49544_i0 PRJNA509429 50372 153 1.355932 2.07457596 Mastigamoeba balamuthi 108607 Evosea other_Eukaryota 99 1.59e-16   NTclustered gi|19911164|dbj|AB066364.1| 108607 g49544 i0 95.161 1.2156862745098 62 3 41 0 92 153 1010 949 Mastigamoeba balamuthi gene for LSU rRNA, partial sequence, clone:MbR2 blastn 186 99 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Mastigamoebidae Mastigamoeba Mastigamoeba balamuthi
15787998 15787998 PRJNA509429_P_NODE_46293_length_162_cov_6.535433_g45465_i0 PRJNA509429 46293 162 6.535433 10.58740146 Phalansterium solitarium 136499 Evosea other_Eukaryota 58.4 2.9e-4   NTclustered gi|300078500|gb|GU001162.1| 136499 g45465 i0 100 0.191358024691358 31 0 19 0 22 52 4802 4772 Phalansterium solitarium 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 31 58.4 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium solitarium
17062576 17062576 PRJNA509429_P_NODE_44654_length_167_cov_1.310606_g43826_i0 PRJNA509429 44654 167 1.310606 2.18871202 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 276 7.64e-70   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g43826 i0 96.407 1 167 6 100 0 1 167 4345 4179 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 167 276 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
18336863 18336863 PRJNA509429_P_NODE_18555_length_317_cov_1.460993_g17727_i0 PRJNA509429 18555 317 1.460993 4.63134781 Physarum polycephalum 5791 Evosea other_Eukaryota 436 7.019999999999999e-118   NTclustered gi|3221|emb|V01159.1| 5791 g17727 i0 91.562 25.0504731861199 320 21 100 6 1 317 1265 949 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 7941 436 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
20237232 20237232 PRJNA509429_P_NODE_44196_length_168_cov_1.804511_g43368_i0 PRJNA509429 44196 168 1.804511 3.03157848 Platyamoeba 197524 Discosea other_Eukaryota 169 1.34e-37   NTclustered gi|2675812016|gb|PP339682.1| 197527 g43368 i0 88.356 86.4821428571429 146 9 85 8 27 168 207 348 Platyamoeba placida isolate TFES2 small subunit ribosomal RNA gene, partial sequence blastn 14529 169 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;