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contig_metadata

7 rows where bioproject = "PRJNA508758" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA508758 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9412618 9412618 PRJNA508758_P_NODE_28088_length_381_cov_2.415584_g27040_i0 PRJNA508758 28088 381 2.415584 9.20337504 haloarchaeon 3A1-DGR 1071085 Archaea Archaea 56.5 0.003   NTclustered gi|1804090075|gb|CP048032.1| 1071085 g27040 i0 100 0.307086614173228 30 0 8 0 211 240 1418784 1418813 Haloarchaeon 3A1-DGR strain 3A1-DGR chromosome, complete genome blastn 117 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     haloarchaeon 3A1-DGR
14513606 14513606 PRJNA508758_P_NODE_51672_length_296_cov_1.116592_g50624_i0 PRJNA508758 51672 296 1.116592 3.30511232 Promethearchaeia archaeon 3067280 Archaea Archaea 90.1 1.62e-18   NR MFO7795213.1 3067280 g50624 i0 91.8 0.496621621621622 49 4 49.7 0 3 149 666 714 MFO7795213.1 reverse transcriptase family protein [Promethearchaeia archaeon] diamond 147 90.1 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
27646032 27646032 PRJNA508758_P_NODE_86504_length_242_cov_0.917160_g85456_i0 PRJNA508758 86504 242 0.91716 2.2195272 Promethearchaeia archaeon 3067280 Archaea Archaea 74.3 2.77e-13   NR MFO7795213.1 3067280 g85456 i0 92.1 0.471074380165289 38 3 47.1 0 116 3 967 1004 MFO7795213.1 reverse transcriptase family protein [Promethearchaeia archaeon] diamond 114 74.3 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
30772367 30772367 PRJNA508758_P_NODE_19994_length_450_cov_2.236074_g18947_i0 PRJNA508758 19994 450 2.236074 10.062333 Archaeoglobales archaeon 2250258 Archaea Archaea 45.4 0.0276   NR RLI78553.1 2250258 g18947 i0 30.7 0.846666666666667 127 71 78 6 373 23 161 280 RLI78553.1 MAG: signal peptide peptidase SppA [Archaeoglobales archaeon] diamond 381 45.4 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales     Archaeoglobales archaeon
32210696 32210696 PRJNA508758_P_NODE_82038_length_245_cov_1.377907_g80990_i0 PRJNA508758 82038 245 1.377907 3.37587215 Archaea 2157 Archaea Archaea 42.7 0.0298   NR MEM4913105.1 2184738 g80990 i0 50 2.06938775510204 34 14 41.6 1 48 149 10 40 MEM4913105.1 amidohydrolase family protein [Desulfurococcaceae archaeon] diamond 507 42.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae   Desulfurococcaceae archaeon
32290512 32290512 PRJNA508758_P_NODE_4659_length_1134_cov_3.772856_g4079_i0 PRJNA508758 4659 1134 3.772856 42.78418704 Promethearchaeia archaeon 3067280 Archaea Archaea 137 3.879999999999999e-34   NR MFO7797710.1 3067280 g4079 i0 41.7 0.507936507936508 192 109 50.3 3 799 230 42 232 MFO7797710.1 hypothetical protein [Promethearchaeia archaeon] diamond 576 137 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
32700667 32700667 PRJNA508758_P_NODE_89460_length_235_cov_2.074074_g88412_i0 PRJNA508758 89460 235 2.074074 4.8740739 Promethearchaeia archaeon 3067280 Archaea Archaea 105 2.07e-24   NR MFO7795213.1 3067280 g88412 i0 98.1 0.68936170212766 54 1 68.9 0 2 163 969 1022 MFO7795213.1 reverse transcriptase family protein [Promethearchaeia archaeon] diamond 162 105 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;