contig_metadata
5 rows where bioproject = "PRJNA508758", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27677687 | 27677687 | PRJNA508758_P_NODE_80864_length_246_cov_0.890173_g79816_i0 | PRJNA508758 | 80864 | 246 | 0.890173 | 2.18982558 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 46.2 | 0.00203 | NR | MEL6186221.1 | 2818507 | g79816 | i0 | 40.6 | 1.68292682926829 | 69 | 34 | 76.8 | 2 | 196 | 8 | 78 | 145 | MEL6186221.1 amidase family protein [Myxococcota bacterium] | diamond | 414 | 46.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 27772288 | 27772288 | PRJNA508758_P_NODE_29724_length_372_cov_1.715719_g28676_i0 | PRJNA508758 | 29724 | 372 | 1.715719 | 6.38247468 | Myxococcus | 32 | Bacteria | Bacteria | 81.3 | 2.72e-15 | NR | WP_011555356.1 | 32 | g28676 | i0 | 34.7 | 5.03225806451613 | 124 | 67 | 100 | 2 | 1 | 372 | 61 | 170 | WP_011555356.1 MULTISPECIES: serine protease [Myxococcus] | diamond | 1872 | 81.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | |||
| 28371928 | 28371928 | PRJNA508758_P_NODE_88226_length_241_cov_0.916667_g87178_i0 | PRJNA508758 | 88226 | 241 | 0.916667 | 2.20916747 | Archangium sp. | 1872627 | Bacteria | Bacteria | 41.2 | 0.0455 | NR | HYO69169.1 | 1872627 | g87178 | i0 | 48 | 0.622406639004149 | 50 | 22 | 62.2 | 1 | 22 | 171 | 66 | 111 | HYO69169.1 fatty acid-binding protein [Archangium sp.] | diamond | 150 | 41.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium sp. | ||
| 31910415 | 31910415 | PRJNA508758_P_NODE_14657_length_536_cov_1.317495_g13631_i0 | PRJNA508758 | 14657 | 536 | 1.317495 | 7.0617732 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 46.2 | 0.029 | NR | MBM4259063.1 | 2026735 | g13631 | i0 | 30.8 | 0.509328358208955 | 91 | 52 | 49.3 | 3 | 192 | 455 | 54 | 136 | MBM4259063.1 DUF1016 domain-containing protein [Deltaproteobacteria bacterium] | diamond | 273 | 46.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 32100259 | 32100259 | PRJNA508758_P_NODE_75478_length_250_cov_0.870056_g74430_i0 | PRJNA508758 | 75478 | 250 | 0.870056 | 2.17514 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 130 | 3.89e-34 | NR | TMB33464.1 | 2026735 | g74430 | i0 | 72.3 | 1.992 | 83 | 23 | 99.6 | 0 | 2 | 250 | 123 | 205 | TMB33464.1 MAG: NADP-dependent isocitrate dehydrogenase [Deltaproteobacteria bacterium] | diamond | 498 | 130 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;