RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA508758", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA508758 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28940544 28940544 PRJNA508758_P_NODE_55728_length_287_cov_0.995327_g54680_i0 PRJNA508758 55728 287 0.995327 2.85658849 Chloroflexota bacterium 2026724 Bacteria Bacteria 43.1 0.0192   NR MBI3966900.1 2026724 g54680 i0 46.5 0.449477351916376 43 23 44.9 0 180 52 14 56 MBI3966900.1 hypothetical protein [Chloroflexota bacterium] diamond 129 43.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31309392 31309392 PRJNA508758_P_NODE_70095_length_258_cov_1.248649_g69047_i0 PRJNA508758 70095 258 1.248649 3.22151442 Thermoflexales bacterium 2497639 Bacteria Bacteria 43.5 0.0246   NR MBC7228003.1 2497639 g69047 i0 37.7 1.87209302325581 53 32 60.5 1 231 76 83 135 MBC7228003.1 YfhO family protein [Thermoflexales bacterium] diamond 483 43.5 1 Bacteria   Bacillati Chloroflexota Thermoflexia Thermoflexales     Thermoflexales bacterium
32353703 32353703 PRJNA508758_P_NODE_78679_length_248_cov_0.880000_g77631_i0 PRJNA508758 78679 248 0.88 2.1824 Caldilineaceae bacterium 2614250 Bacteria Bacteria 136 2.38e-35   NR MCC6455536.1 2614250 g77631 i0 76.8 0.991935483870968 82 18 98 1 247 5 533 614 MCC6455536.1 superoxide dismutase family protein [Caldilineaceae bacterium] diamond 246 136 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;