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contig_metadata

5 rows where bioproject = "PRJNA508758", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA508758 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12589577 12589577 PRJNA508758_P_NODE_14410_length_541_cov_2.284188_g13388_i0 PRJNA508758 14410 541 2.284188 12.35745708 root 1 Root_unresolved Root_unresolved 54.7 0.015   NTclustered gi|921121930|ref|XM_013580129.1| 51315 g13388 i0 100 0.171903881700555 29 0 5 0 171 199 1608 1636 Eimeria necatrix hypothetical protein, conserved partial mRNA blastn 93 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
13238778 13238778 PRJNA508758_P_NODE_7411_length_843_cov_5.594805_g6548_i0 PRJNA508758 7411 843 5.594805 47.16420615 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.024   NTclustered gi|124506116|ref|XM_001351620.1| 36329 g6548 i0 100 0.0344009489916963 29 0 3 0 297 325 3114 3142 Plasmodium falciparum 3D7 phosphatidylinositol 4-kinase (PF3D7_0509800), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
23436811 23436811 PRJNA508758_P_NODE_16119_length_507_cov_1.698157_g15074_i0 PRJNA508758 16119 507 1.698157 8.60965599 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.05   NTclustered gi|921132605|ref|XM_013585384.1| 51315 g15074 i0 100 0.0552268244575937 28 0 6 0 420 447 655 628 Eimeria necatrix hypothetical protein, conserved partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
23436858 23436858 PRJNA508758_P_NODE_19659_length_454_cov_2.293963_g18612_i0 PRJNA508758 19659 454 2.293963 10.41459202 Cryptosporidium ubiquitum 857276 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.044   NTclustered gi|1624735482|ref|XM_029020510.1| 857276 g18612 i0 100 0.0616740088105727 28 0 6 0 24 51 4444 4417 Cryptosporidium ubiquitum chromatinic protein (cubi_03497), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ubiquitum
25337088 25337088 PRJNA508758_P_NODE_57940_length_282_cov_1.416268_g56892_i0 PRJNA508758 57940 282 1.416268 3.99387576 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 100 9.16e-17   NTclustered gi|1843572816|ref|XM_034566237.1| 5823 g56892 i0 92.754 23.7234042553191 69 5 24 0 214 282 425 357 Plasmodium berghei ANKA histone H2A.Z, putative (PBANKA_1217600), partial mRNA blastn 6690 100 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;