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contig_metadata

9 rows where bioproject = "PRJNA506002" and tax_clade = "Methanomada group"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 9 ✖

bioproject 1

  • PRJNA506002 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20236999 20236999 PRJNA506002_S_NODE_47596_length_266_cov_1.191710_g47350_i0 PRJNA506002 47596 266 1.19171 3.1699486 root 1 Root_unresolved Root_unresolved 52.8 0.024   NTclustered gi|2419023206|gb|CP064324.1| 145262 g47350 i0 100 0.43609022556390997 28 0 11 0 36 63 1085258 1085285 Methanothermobacter thermautotrophicus strain Delta H chromosome, complete genome blastn 116 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanothermobacter Methanothermobacter thermautotrophicus
29603012 29603012 PRJNA506002_S_NODE_39730_length_283_cov_0.923810_g39484_i0 PRJNA506002 39730 283 0.92381 2.6143823 Methanobrevibacter sp. 66852 Archaea Archaea 80.9 6.97e-17   NR MBQ9160591.1 66852 g39484 i0 97.4 0.402826855123675 38 1 40.3 0 281 168 120 157 MBQ9160591.1 hypothetical protein [Methanobrevibacter sp.] diamond 114 80.9 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29761091 29761091 PRJNA506002_S_NODE_60591_length_247_cov_0.839080_g60345_i0 PRJNA506002 60591 247 0.83908 2.0725276 Methanobrevibacter sp. 66852 Archaea Archaea 83.2 5.98e-19   NR MBQ9160592.1 66852 g60345 i0 97.4 0.473684210526316 39 1 47.4 0 3 119 34 72 MBQ9160592.1 hypothetical protein [Methanobrevibacter sp.] diamond 117 83.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29824196 29824196 PRJNA506002_S_NODE_5291_length_472_cov_1.531328_g5046_i0 PRJNA506002 5291 472 1.531328 7.22786816 Methanobrevibacter sp. 66852 Archaea Archaea 202 1.71e-64   NR MBQ9160596.1 66852 g5046 i0 100 0.654661016949153 103 0 65.5 0 2 310 1 103 MBQ9160596.1 hypothetical protein [Methanobrevibacter sp.] diamond 309 202 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31277716 31277716 PRJNA506002_S_NODE_44795_length_272_cov_0.859296_g44549_i0 PRJNA506002 44795 272 0.859296 2.33728512 Methanobrevibacter sp. 66852 Archaea Archaea 144 5.55e-41   NR MBQ9160590.1 66852 g44549 i0 89.5 0.838235294117647 76 8 83.8 0 264 37 123 198 MBQ9160590.1 hypothetical protein [Methanobrevibacter sp.] diamond 228 144 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31815459 31815459 PRJNA506002_S_NODE_13477_length_382_cov_0.915858_g13231_i0 PRJNA506002 13477 382 0.915858 3.49857756 Methanobrevibacter sp. 66852 Archaea Archaea 249 4.96e-80   NR MBR1611692.1 66852 g13231 i0 96.9 0.99738219895288 127 4 99.7 0 382 2 48 174 MBR1611692.1 hypothetical protein [Methanobrevibacter sp.] diamond 381 249 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32480126 32480126 PRJNA506002_S_NODE_6019_length_459_cov_1.261658_g5774_i0 PRJNA506002 6019 459 1.261658 5.79101022 Methanobrevibacter sp. 66852 Archaea Archaea 99 2.04e-21   NR MBR1611692.1 66852 g5774 i0 96 0.326797385620915 50 2 32.7 0 440 291 297 346 MBR1611692.1 hypothetical protein [Methanobrevibacter sp.] diamond 150 99 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32637542 32637542 PRJNA506002_S_NODE_13200_length_384_cov_1.324759_g12954_i0 PRJNA506002 13200 384 1.324759 5.08707456 Methanobrevibacter sp. 66852 Archaea Archaea 192 5.5300000000000005e-58   NR MBR1611692.1 66852 g12954 i0 97.8 0.71875 92 2 71.9 0 328 53 178 269 MBR1611692.1 hypothetical protein [Methanobrevibacter sp.] diamond 276 192 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32889521 32889521 PRJNA506002_S_NODE_41460_length_279_cov_1.121359_g41214_i0 PRJNA506002 41460 279 1.121359 3.12859161 Methanobrevibacter sp. 66852 Archaea Archaea 70.1 2.14e-13   NR MBQ9160597.1 66852 g41214 i0 100 0.344086021505376 32 0 34.4 0 98 3 1 32 MBQ9160597.1 hypothetical protein [Methanobrevibacter sp.] diamond 96 70.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;