RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA505329" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA505329 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30139906 30139906 PRJNA505329_P_NODE_42192_length_169_cov_0.866667_g41721_i0 PRJNA505329 42192 169 0.866667 1.46466723 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.9 0.00549   NR MFA6552142.1 2053589 g41721 i0 45.5 0.781065088757396 44 21 78.1 1 168 37 472 512 MFA6552142.1 phenylalanine--tRNA ligase subunit beta [Candidatus Paceibacterota bacterium] diamond 132 43.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30614072 30614072 PRJNA505329_P_NODE_27513_length_191_cov_1.443662_g27042_i0 PRJNA505329 27513 191 1.443662 2.75739442 Minisyncoccota bacterium 2053589 Bacteria Bacteria 74.3 1.38e-13   NR HEV7449048.1 2053589 g27042 i0 83.7 0.675392670157068 43 7 67.5 0 5 133 3410 3452 HEV7449048.1 tail fiber domain-containing protein [Candidatus Paceibacterota bacterium] diamond 129 74.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;