contig_metadata
10 rows where bioproject = "PRJNA505329" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1110332 | 1110332 | PRJNA505329_P_NODE_33641_length_182_cov_1.263158_g33170_i0 | PRJNA505329 | 33641 | 182 | 1.263158 | 2.29894756 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 108 | 4.33e-27 | NR | MDQ3522939.1 | 2026742 | g33170 | i0 | 86.7 | 1.97802197802198 | 60 | 8 | 98.9 | 0 | 2 | 181 | 136 | 195 | MDQ3522939.1 IS3 family transposase [Gemmatimonadota bacterium] | diamond | 360 | 108 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 2385841 | 2385841 | PRJNA505329_P_NODE_29342_length_188_cov_2.208633_g28871_i0 | PRJNA505329 | 29342 | 188 | 2.208633 | 4.15223004 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 82.8 | 7.65e-17 | NR | HEX6104385.1 | 2448054 | g28871 | i0 | 56.5 | 1.3563829787234 | 85 | 3 | 81.4 | 1 | 154 | 2 | 1 | 85 | HEX6104385.1 XdhC family protein [Gemmatimonadales bacterium] | diamond | 255 | 82.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 9411521 | 9411521 | PRJNA505329_P_NODE_35668_length_178_cov_3.178295_g35197_i0 | PRJNA505329 | 35668 | 178 | 3.178295 | 5.6573651 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g35197 | i0 | 96.97 | 0.52247191011236 | 33 | 1 | 19 | 0 | 1 | 33 | 4068852 | 4068884 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 93 | 56.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 9411628 | 9411628 | PRJNA505329_P_NODE_44908_length_166_cov_2.564103_g44437_i0 | PRJNA505329 | 44908 | 166 | 2.564103 | 4.25641098 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 87.4 | 9.94e-19 | NR | HSD33230.1 | 2448054 | g44437 | i0 | 80.4 | 5.25903614457831 | 51 | 10 | 92.2 | 0 | 155 | 3 | 19 | 69 | HSD33230.1 IS481 family transposase [Gemmatimonadales bacterium] | diamond | 873 | 87.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 10686973 | 10686973 | PRJNA505329_P_NODE_18029_length_214_cov_2.157576_g17558_i0 | PRJNA505329 | 18029 | 214 | 2.157576 | 4.61721264 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 302 | 1.7e-77 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g17558 | i0 | 92.453 | 323.92523364486 | 212 | 14 | 99 | 2 | 1 | 211 | 1902278 | 1902488 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 69320 | 302 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 15785947 | 15785947 | PRJNA505329_P_NODE_21453_length_201_cov_3.125000_g20982_i0 | PRJNA505329 | 21453 | 201 | 3.125 | 6.28125 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 198 | 2.12e-46 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g20982 | i0 | 84.793 | 134.582089552239 | 217 | 12 | 98 | 4 | 1 | 196 | 131142 | 131358 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 27051 | 198 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 28466808 | 28466808 | PRJNA505329_P_NODE_14366_length_233_cov_2.766304_g13895_i0 | PRJNA505329 | 14366 | 233 | 2.766304 | 6.44548832 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 66.2 | 1.68e-10 | NR | MBK8246937.1 | 2026742 | g13895 | i0 | 100 | 0.412017167381974 | 32 | 0 | 41.2 | 0 | 230 | 135 | 362 | 393 | MBK8246937.1 PQQ-binding-like beta-propeller repeat protein [Gemmatimonadota bacterium] | diamond | 96 | 66.2 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 28703227 | 28703227 | PRJNA505329_P_NODE_44847_length_166_cov_2.632479_g44376_i0 | PRJNA505329 | 44847 | 166 | 2.632479 | 4.36991514 | Bacteria | 2 | Bacteria | Bacteria | 40.4 | 0.0246 | NR | HEU4565390.1 | 2026741 | g44376 | i0 | 44.4 | 4.1566265060241 | 45 | 25 | 81.3 | 0 | 6 | 140 | 41 | 85 | HEU4565390.1 CPXCG motif-containing cysteine-rich protein [Gemmatimonadaceae bacterium] | diamond | 690 | 40.8 | 0.990196078431373 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 29950759 | 29950759 | PRJNA505329_P_NODE_24211_length_196_cov_3.857143_g23740_i0 | PRJNA505329 | 24211 | 196 | 3.857143 | 7.56000028 | Gemmatimonas sp. | 1962908 | Bacteria | Bacteria | 65.9 | 1.43e-10 | NR | MQA90924.1 | 1962908 | g23740 | i0 | 67.4 | 0.704081632653061 | 46 | 15 | 70.4 | 0 | 58 | 195 | 785 | 830 | MQA90924.1 helicase [Gemmatimonas sp.] | diamond | 138 | 65.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas sp. | |
| 30361897 | 30361897 | PRJNA505329_P_NODE_27492_length_191_cov_1.443662_g27021_i0 | PRJNA505329 | 27492 | 191 | 1.443662 | 2.75739442 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 117 | 1.18e-28 | NR | MBP2646843.1 | 2026742 | g27021 | i0 | 95.2 | 0.989528795811518 | 63 | 3 | 99 | 0 | 1 | 189 | 1 | 63 | MBP2646843.1 Threonyl-tRNA synthetase [Gemmatimonadota bacterium] | diamond | 189 | 117 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;