RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA505329", tax_clade = "Opisthokonta" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA505329 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14512443 14512443 PRJNA505329_P_NODE_41432_length_169_cov_3.658333_g40961_i0 PRJNA505329 41432 169 3.658333 6.18258277 Entomophthora syrphi 382332 Fungi Fungi 261 2.15e-65   NTclustered gi|240104220|gb|DQ481230.2| 382332 g40961 i0 95.152 63.6390532544379 165 8 98 0 3 167 296 132 Entomophthora syrphi isolate ARSEF 5595 28S ribosomal RNA gene, partial sequence blastn 10755 261 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora syrphi
20885631 20885631 PRJNA505329_P_NODE_48777_length_163_cov_0.912281_g48306_i0 PRJNA505329 48777 163 0.912281 1.48701803 Entomophthora muscae 34485 Fungi Fungi 257 2.68e-64   NTclustered gi|82398173|gb|DQ273772.1| 34485 g48306 i0 95.652 3.71779141104294 161 5 98 2 1 160 1682 1841 Entomophthora muscae isolate AFTOL-ID 28 28S ribosomal RNA gene, partial sequence blastn 606 257 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora muscae
23436048 23436048 PRJNA505329_P_NODE_50719_length_160_cov_2.486486_g50248_i0 PRJNA505329 50719 160 2.486486 3.9783776 Entomophthora muscae 34485 Fungi Fungi 257 2.62e-64   NTclustered gi|82398173|gb|DQ273772.1| 34485 g50248 i0 96.178 74.825 157 6 98 0 1 157 1553 1397 Entomophthora muscae isolate AFTOL-ID 28 28S ribosomal RNA gene, partial sequence blastn 11972 257 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora muscae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;