RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA505329", tax_clade = "Opisthokonta" and tax_phylum = "Microsporidia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA505329 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5587338 5587338 PRJNA505329_P_NODE_50005_length_162_cov_0.920354_g49534_i0 PRJNA505329 50005 162 0.920354 1.49097348 Endoreticulatus sp. CHW-2004 Taiwan 262393 Fungi Fungi 226 7.509999999999998e-55   NTclustered gi|63095238|gb|AY960111.1| 262393 g49534 i0 92.453 4.90740740740741 159 10 98 2 4 161 126 283 Endoreticulatus sp. CHW-2004 Taiwan large subunit ribosomal RNA gene, complete sequence blastn 795 226 1 Eukaryota Opisthokonta Fungi Microsporidia       Endoreticulatus Endoreticulatus sp. CHW-2004 Taiwan
6213854 6213854 PRJNA505329_P_NODE_41205_length_170_cov_1.694215_g40734_i0 PRJNA505329 41205 170 1.694215 2.8801655 Endoreticulatus 42400 Fungi Fungi 97.1 6.48e-16   NTclustered gi|63095238|gb|AY960111.1| 262393 g40734 i0 78.846 8.25882352941177 156 24 89 9 2 152 1504 1353 Endoreticulatus sp. CHW-2004 Taiwan large subunit ribosomal RNA gene, complete sequence blastn 1404 97.1 1 Eukaryota Opisthokonta Fungi Microsporidia       Endoreticulatus Endoreticulatus sp. CHW-2004 Taiwan
27866640 27866640 PRJNA505329_P_NODE_29545_length_188_cov_1.474820_g29074_i0 PRJNA505329 29545 188 1.47482 2.7726616 Mitosporidium daphniae 1485682 Fungi Fungi 42.4 0.0218   NR XP_013238773.1 1485682 g29074 i0 39.1 1.02127659574468 64 28 97.3 3 6 188 119 174 XP_013238773.1 uncharacterized protein DI09_188p60, partial [Mitosporidium daphniae] diamond 192 42.4 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;